RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 USP15Q9Y4E8 981 aaPredicted RBP7.03□□□□□ -1.28
CD44-204ENST00000279452 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 CCDC195A0A1B0GUA6 201 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 PPP1R3GB7ZBB8 358 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 M0QZQ0 153 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 SLC16A3O15427 465 aaKnown RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 CCL16O15467 120 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 MBTPS2O43462 519 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 STX10O60499 249 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 LILRB3O75022 631 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 RFPL2O75678 378 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 EFEMP2O95967 443 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 LRG1P02750 347 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 HOXB8P17481 243 aaPredicted RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 TYMPP19971 482 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 BMP6P22004 513 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 PAX3P23760 479 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 ACAT1P24752 427 aaKnown RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 MYL6P60660 151 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 MYL7Q01449 175 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 TSPY1Q01534 308 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 NCOA4Q13772 614 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 NFIL3Q16649 462 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 PUS10Q3MIT2 529 aaKnown RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 DPCR1Q3MIW9 517 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 WDR72Q3MJ13 1102 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 ZCWPW2Q504Y3 356 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 COBLL1Q53SF7 1204 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 TDRD10Q5VZ19 366 aaKnown RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 CENPPQ6IPU0 288 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 RSPO2Q6UXX9 243 aaPredicted RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 ADGRF2Q8IZF7 708 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 SMRP1Q8NCR6 262 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 FAM200AQ8TCP9 573 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 PLEKHO2Q8TD55 490 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 TMC2Q8TDI7 906 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 ADAMTS19Q8TE59 1207 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 PARD3BQ8TEW8 1205 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 SLC22A17Q8WUG5 538 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 SMG7Q92540 1137 aaKnown RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 SYAP1Q96A49 352 aaPredicted RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 ELMO3Q96BJ8 720 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 RPGRIP1Q96KN7 1286 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 RIPOR3Q96MK2 946 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 SEPT5Q99719 369 aaPredicted RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 SNX25Q9H3E2 840 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 PLEKHA4Q9H4M7 779 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 DDX43Q9NXZ2 648 aaKnown RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 ARMCX3Q9UH62 379 aaPredicted RBP7.02□□□□□ -1.29
CD44-204ENST00000279452 SIX4Q9UIU6 781 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 CDH22Q9UJ99 828 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 BACE2Q9Y5Z0 518 aa7.02□□□□□ -1.29
CD44-204ENST00000279452 WDR27A2RRH5 827 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 GRXCR2A6NFK2 248 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 OR6C75A6NL08 312 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 MAPK13O15264 365 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 XYLBO75191 536 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 FGFR1OPO95684 399 aaKnown RBP7.01□□□□□ -1.29
CD44-204ENST00000279452 CST3P01034 146 aaPredicted RBP7.01□□□□□ -1.29
CD44-204ENST00000279452 HLA-DRAP01903 254 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 P4HA1P13674 534 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 RAP1GAPP47736 663 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 AARSP49588 968 aaKnown RBP eCLIP7.01□□□□□ -1.29
CD44-204ENST00000279452 MXI1P50539 228 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 NLRP12P59046 1061 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 PSMC1P62191 440 aaKnown RBP7.01□□□□□ -1.29
CD44-204ENST00000279452 ITIH3Q06033 890 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 ADCY1Q08828 1119 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 KCNC3Q14003 757 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 RAB33AQ14088 237 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 CBX2Q14781 532 aaPredicted RBP7.01□□□□□ -1.29
CD44-204ENST00000279452 COL19A1Q14993 1142 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 SLC39A12Q504Y0 691 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 ZNF667Q5HYK9 610 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 ATAT1Q5SQI0 421 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 CCDC183Q5T5S1 534 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 SCARA3Q6AZY7 606 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 SLC8B1Q6J4K2 584 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 TTI2Q6NXR4 508 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 CAVIN1Q6NZI2 390 aaKnown RBP7.01□□□□□ -1.29
CD44-204ENST00000279452 SYCE2Q6PIF2 218 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 TMEM184AQ6ZMB5 413 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 RNF19BQ6ZMZ0 732 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 CCDC149Q6ZUS6 474 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 SV2AQ7L0J3 742 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 GPR65Q8IYL9 337 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 ELMOD1Q8N336 334 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 PDCL2Q8N4E4 241 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 PIP4P2Q8N4L2 257 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 TOP6BLQ8N6T0 577 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 MLKLQ8NB16 471 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 OR6B3Q8NGW1 331 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 OR10T2Q8NGX3 314 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 ZNF516Q92618 1163 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 MSLNLQ96KJ4 702 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 CEP63Q96MT8 703 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 NECAB3Q96P71 396 aaPredicted RBP7.01□□□□□ -1.29
CD44-204ENST00000279452 TMEM209Q96SK2 561 aa7.01□□□□□ -1.29
CD44-204ENST00000279452 UHRF1Q96T88 793 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms