RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 FAM49BQ9NUQ9 324 aa12.56□□□□□ -0.4
SLC13A3-201ENST00000279027 TMEM59LQ9UK28 342 aa12.56□□□□□ -0.4
SLC13A3-201ENST00000279027 COL24A1Q17RW2 1714 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 TMEM120BA0PK00 339 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 LYPLA2O95372 231 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 NFX1Q12986 1120 aaKnown RBP12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 ZACNQ401N2 412 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 XRRA1Q6P2D8 792 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 C1orf228Q6PIY5 440 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 FAM81BQ96LP2 452 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 PORCNQ9H237 461 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 EFCC1Q9HA90 598 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 PDGFCQ9NRA1 345 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 GINM1Q9NU53 330 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 PTPRJQ12913 1337 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 RPTORQ8N122 1335 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 DLEC1Q9Y238 1755 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 RREB1Q92766 1687 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 PROSCO94903 275 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 TJP3O95049 919 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 ATP5DP30049 168 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 PPP2R5DQ14738 602 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 DARS2Q6PI48 645 aaKnown RBP12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 HVCN1Q96D96 273 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 MFSD14AQ96MC6 490 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 ADPGKQ9BRR6 497 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 CNOT10Q9H9A5 744 aaKnown RBP12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 FGFR1OP2Q9NVK5 253 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 MAP3K20Q9NYL2 800 aaKnown RBP12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 IP6K2Q9UHH9 426 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 SPATA31C2B4DYI2 1134 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 DESP17661 470 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 CA4P22748 312 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 GCNT1Q02742 428 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 PSMD6Q15008 389 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 NFIL3Q16649 462 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 EEF1DP3Q658K8 133 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 SCARA3Q6AZY7 606 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 PACS2Q86VP3 889 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 VSIG1Q86XK7 387 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 RNF169Q8NCN4 708 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 MORC4Q8TE76 937 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 FAM149B1Q96BN6 582 aa12.55□□□□□ -0.4
SLC13A3-201ENST00000279027 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 RIPK2O43353 540 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 BANF1O75531 89 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 CYP1A2P05177 515 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 ZNF286BP0CG31 522 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 TCF4P15884 667 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 CREB1P16220 341 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 SKOR1P84550 965 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 AGBL2Q5U5Z8 902 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 CASC4Q6P4E1 433 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 CCDC63Q8NA47 563 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 CHST13Q8NET6 341 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 SLC10A4Q96EP9 437 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 CGRRF1Q99675 332 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 IQCGQ9H095 443 aaKnown RBP12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 DNPEPQ9ULA0 475 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 A0A087WZ62 844 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 CST8O60676 142 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 GBP1P32455 592 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 SNRPFP62306 86 aaKnown RBP12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 ZBTB16Q05516 673 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 FAXCQ5TGI0 409 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 B3GNT9Q6UX72 402 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 MREGQ8N565 214 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 MTMR14Q8NCE2 650 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 OR6B3Q8NGW1 331 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 FDXACB1Q9BRP7 624 aaPredicted RBP12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 TACO1Q9BSH4 297 aaKnown RBP12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 NIF3L1Q9GZT8 377 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 MTFR1LQ9H019 292 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 ASCC2Q9H1I8 757 aaPredicted RBP12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 METTL5Q9NRN9 209 aaKnown RBP12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 AFG3L2Q9Y4W6 797 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 MAD1L1Q9Y6D9 718 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 ADCY3O60266 1144 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 TOM1L1O75674 476 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 HAUS2Q9NVX0 235 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 GPATCH2LQ9NWQ4 482 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 GPRC5DQ9NZD1 345 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 DDX20Q9UHI6 824 aaKnown RBP12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 NEU2Q9Y3R4 380 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 GRIN2DO15399 1336 aa12.54□□□□□ -0.4
SLC13A3-201ENST00000279027 CALB1P05937 261 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 TAS1R3Q7RTX0 852 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 C12orf56Q8IXR9 622 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 ZDHHC14Q8IZN3 488 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 PYROXD1Q8WU10 500 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 DCLK3Q9C098 648 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 R3HDMLQ9H3Y0 253 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 SBF2Q86WG5 1849 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 UBR3Q6ZT12 1888 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 OGTO15294 1046 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 MYBL1P10243 752 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 OSBPP22059 807 aa12.53□□□□□ -0.4
SLC13A3-201ENST00000279027 SLC1A1P43005 524 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms