RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CACNB3P54284 484 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 NCKAP1LP55160 1127 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 NKX3-2P78367 333 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 TRIM29Q14134 588 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 R3HDM1Q15032 1099 aaKnown RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 E2F5Q15329 346 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 FAM209BQ5JX69 171 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 ARMC4Q5T2S8 1044 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 ABHD17CQ6PCB6 329 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 UNC5DQ6UXZ4 953 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 AMIGO3Q86WK7 504 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 NBPF5PQ86XG9 351 aaPredicted RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 VSIG1Q86XK7 387 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 ZC3H7AQ8IWR0 971 aaKnown RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 LRRC56Q8IYG6 542 aaPredicted RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 GRAMD1CQ8IYS0 662 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 CACNA2D3Q8IZS8 1091 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 LTV1Q96GA3 475 aaPredicted RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 C1orf159Q96HA4 380 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 TMEM41AQ96HV5 264 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 KCNJ15Q99712 375 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 SDF4Q9BRK5 362 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 ANP32EQ9BTT0 268 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 KATNAL1Q9BW62 490 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 KIAA1683Q9H0B3 1180 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 DHX36Q9H2U1 1008 aaKnown RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 CYP4F11Q9HBI6 524 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 CD320Q9NPF0 282 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 ZNF277Q9NRM2 450 aaPredicted RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 OLA1Q9NTK5 396 aaKnown RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 THG1LQ9NWX6 298 aaKnown RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 PALD1Q9ULE6 856 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 JAG2Q9Y219 1238 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 RRP7AQ9Y3A4 280 aaKnown RBP5.12□□□□□ -1.59
CD44-202ENST00000278385 MAP3K19Q56UN5 1328 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 ABCC6O95255 1503 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 LMO7Q8WWI1 1683 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 THSD7AQ9UPZ6 1657 aa5.12□□□□□ -1.59
CD44-202ENST00000278385 CRYBG1Q9Y4K1 1723 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 BLACEA4D250 179 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 H0Y3Z8 333 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 RTCAO00442 366 aaKnown RBP5.11□□□□□ -1.59
CD44-202ENST00000278385 H2AFYO75367 372 aaKnown RBP5.11□□□□□ -1.59
CD44-202ENST00000278385 CRTAMO95727 393 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 CYP2C8P10632 490 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 HSPA5P11021 654 aaKnown RBP5.11□□□□□ -1.59
CD44-202ENST00000278385 MYCLP12524 364 aaPredicted RBP5.11□□□□□ -1.59
CD44-202ENST00000278385 FBLN1P23142 703 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 CNTFP26441 200 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 HMGB2P26583 209 aaKnown RBP5.11□□□□□ -1.59
CD44-202ENST00000278385 CASQ1P31415 396 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 HPDP32754 393 aaPredicted RBP5.11□□□□□ -1.59
CD44-202ENST00000278385 ATP6V1E1P36543 226 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 LIFRP42702 1097 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 TUBP50607 506 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 EPHB3P54753 998 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 DRG2P55039 364 aaKnown RBP5.11□□□□□ -1.59
CD44-202ENST00000278385 UBASH3AP57075 661 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 PRKG1Q13976 671 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 RRS1Q15050 365 aaKnown RBP5.11□□□□□ -1.59
CD44-202ENST00000278385 ACAP2Q15057 778 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 POSTNQ15063 836 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 CYP4F22Q6NT55 531 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 KCNT2Q6UVM3 1135 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 CD300LDQ6UXZ3 194 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 IQCA1Q86XH1 822 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 DENND1CQ8IV53 801 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 ZNF527Q8NB42 609 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 CCDC191Q8NCU4 936 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 ZMIZ2Q8NF64 920 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 MGARPQ8TDB4 240 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 CHTF18Q8WVB6 975 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 SLC5A5Q92911 643 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 C1GALT1C1Q96EU7 318 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 PWWP2AQ96N64 755 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 NCAPGQ9BPX3 1015 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 ZWILCHQ9H900 591 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 STARD7Q9NQZ5 370 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 CATSPERZQ9NTU4 200 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 IRAK4Q9NWZ3 460 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 WDR35Q9P2L0 1181 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 GRHPRQ9UBQ7 328 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 AASSQ9UDR5 926 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 HERC5Q9UII4 1024 aaKnown RBP5.11□□□□□ -1.59
CD44-202ENST00000278385 PADI4Q9UM07 663 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 ZKSCAN5Q9Y2L8 839 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 IKBKGQ9Y6K9 419 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 PMF1-BGLAPU3KQ54 211 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 CGNL1Q0VF96 1302 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 KIF24Q5T7B8 1368 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 NFAT5O94916 1531 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 PIK3C2AO00443 1686 aa5.11□□□□□ -1.59
CD44-202ENST00000278385 RTL1A6NKG5 1358 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 RHPN2P1A8MT19 583 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 FOXN3O00409 490 aaPredicted RBP5.1□□□□□ -1.59
CD44-202ENST00000278385 TRAF5O00463 557 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 KPNA5O15131 536 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 B3GALT2O43825 422 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 PARP1P09874 1014 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms