RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 RHOT2Q8IXI1 618 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 USP38Q8NB14 1042 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 WHAMMQ8TF30 809 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 CALR3Q96L12 384 aaKnown RBP15.5■□□□□ 0.07
TRIM23-202ENST00000274327 ZSWIM1Q9BR11 485 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 TLR10Q9BXR5 811 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 TRPV6Q9H1D0 765 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 OSGEPQ9NPF4 335 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 GTF3C4Q9UKN8 822 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 SNX12Q9UMY4 172 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 PIRO00625 290 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 MGEA5O60502 916 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 CILPO75339 1184 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 MTA2O94776 668 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 CYP1A2P05177 515 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 PAEPP09466 180 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 CKBP12277 381 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 CDK7P50613 346 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 CDH8P55286 799 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 NOMO3P69849 1222 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 CBX1P83916 185 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 INCA1Q0VD86 236 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 MYO1EQ12965 1108 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 CYFIP2Q96F07 1278 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 PCDHGC3Q9UN70 934 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 COG5Q9UP83 839 aa15.5■□□□□ 0.07
TRIM23-202ENST00000274327 PTGESO14684 152 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 TLR3O15455 904 aaKnown RBP15.49■□□□□ 0.07
TRIM23-202ENST00000274327 NCK2O43639 380 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 ZNF623O75123 536 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 ITGA4P13612 1032 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 RAD23BP54727 409 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 TNNC1P63316 161 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 MTFR1Q15390 333 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 PPP1R2P3Q6NXS1 205 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 HACE1Q8IYU2 909 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
TRIM23-202ENST00000274327 TTC39CQ8N584 583 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 PPP1R10Q96QC0 940 aaKnown RBP15.49■□□□□ 0.07
TRIM23-202ENST00000274327 ABCB6Q9NP58 842 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 RNF19AQ9NV58 838 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 OGDHLQ9ULD0 1010 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 HYOU1Q9Y4L1 999 aa15.49■□□□□ 0.07
TRIM23-202ENST00000274327 FAM170AA1A519 330 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 TADA3O75528 432 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 FTCDO95954 541 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 HSPA6P17066 643 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 BRD2P25440 801 aaKnown RBP15.48■□□□□ 0.07
TRIM23-202ENST00000274327 LRPAP1P30533 357 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 RAB27AP51159 221 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 SOX4Q06945 474 aaPredicted RBP15.48■□□□□ 0.07
TRIM23-202ENST00000274327 ZNF394Q53GI3 561 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 NAA35Q5VZE5 725 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 MCOLN2Q8IZK6 566 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 SYCE1Q8N0S2 351 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 CEP112Q8N8E3 955 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 SLC4A11Q8NBS3 891 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 MNS1Q8NEH6 495 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 TFAP2BQ92481 460 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 ZNF653Q96CK0 615 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 TWNKQ96RR1 684 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 ELOVL4Q9GZR5 314 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 PUF60Q9UHX1 559 aaKnown RBP15.48■□□□□ 0.07
TRIM23-202ENST00000274327 BARX2Q9UMQ3 279 aaPredicted RBP15.48■□□□□ 0.07
TRIM23-202ENST00000274327 STXBP5LQ9Y2K9 1186 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 GIT1Q9Y2X7 761 aa15.48■□□□□ 0.07
TRIM23-202ENST00000274327 MEIS3P2A8K0S8 358 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 SRGAP2O75044 1071 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 TFRCP02786 760 aaKnown RBP15.47■□□□□ 0.07
TRIM23-202ENST00000274327 MYBL1P10243 752 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 TCP1P17987 556 aaKnown RBP15.47■□□□□ 0.07
TRIM23-202ENST00000274327 CDH5P33151 784 aaPredicted RBP15.47■□□□□ 0.07
TRIM23-202ENST00000274327 AGMOQ6ZNB7 445 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 MON1BQ7L1V2 547 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 PHF13Q86YI8 300 aaPredicted RBP15.47■□□□□ 0.07
TRIM23-202ENST00000274327 GSTCDQ8NEC7 633 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 CPA5Q8WXQ8 436 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 TRIM11Q96F44 468 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 OSBPL9Q96SU4 736 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 AVENQ9NQS1 362 aaPredicted RBP15.47■□□□□ 0.07
TRIM23-202ENST00000274327 CTTNBP2NLQ9P2B4 639 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 HMGXB4Q9UGU5 601 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 BUB1BO60566 1050 aaPredicted RBP15.47■□□□□ 0.07
TRIM23-202ENST00000274327 LSM8O95777 96 aaKnown RBP15.47■□□□□ 0.07
TRIM23-202ENST00000274327 ATF7P17544 494 aaPredicted RBP15.47■□□□□ 0.07
TRIM23-202ENST00000274327 PNPLA4P41247 253 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 NSFP46459 744 aaKnown RBP15.47■□□□□ 0.07
TRIM23-202ENST00000274327 PTP4A2Q12974 167 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 MBTPS1Q14703 1052 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 PASD1Q8IV76 773 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 TMEM176AQ96HP8 235 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 VCPIP1Q96JH7 1222 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 ZNF560Q96MR9 790 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 DEFB118Q96PH6 123 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 UVRAGQ9P2Y5 699 aa15.47■□□□□ 0.07
TRIM23-202ENST00000274327 A0A0U1RQF3 1178 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 EFCAB8A8MWE9 144 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 ATMINO43313 823 aaPredicted RBP15.46■□□□□ 0.07
TRIM23-202ENST00000274327 CCL5P13501 91 aa15.46■□□□□ 0.07
TRIM23-202ENST00000274327 SSTR3P32745 418 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms