RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 NAP1L2Q9ULW6 460 aaPredicted RBP10.89□□□□□ -0.67
LRTM1-201ENST00000273286 NOC2LQ9Y3T9 749 aaKnown RBP10.89□□□□□ -0.67
LRTM1-201ENST00000273286 CAPN6Q9Y6Q1 641 aa10.89□□□□□ -0.67
LRTM1-201ENST00000273286 MYH9P35579 1960 aaKnown RBP10.89□□□□□ -0.67
LRTM1-201ENST00000273286 KIAA1671Q9BY89 1806 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 H3BS24 57 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 LINC01565O15544 149 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 PRPF3O43395 683 aaKnown RBP10.88□□□□□ -0.67
LRTM1-201ENST00000273286 PGRP06401 933 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 SFNP31947 248 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 GTF2F1P35269 517 aaKnown RBP eCLIP10.88□□□□□ -0.67
LRTM1-201ENST00000273286 IRX6P78412 446 aaPredicted RBP10.88□□□□□ -0.67
LRTM1-201ENST00000273286 FAM189BP81408 668 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 KRT17Q04695 432 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 BMS1Q14692 1282 aaKnown RBP10.88□□□□□ -0.67
LRTM1-201ENST00000273286 CBX2Q14781 532 aaPredicted RBP10.88□□□□□ -0.67
LRTM1-201ENST00000273286 KIZQ2M2Z5 673 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 ADCK5Q3MIX3 580 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 JAKMIP3Q5VZ66 844 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 LRRC43Q8N309 656 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 METTL13Q8N6R0 699 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 RASGRP4Q8TDF6 673 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 TMEM40Q8WWA1 233 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 TCEANC2Q96MN5 208 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 RIT2Q99578 217 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 DPH2Q9BQC3 489 aaPredicted RBP10.88□□□□□ -0.67
LRTM1-201ENST00000273286 PHF7Q9BWX1 381 aaPredicted RBP10.88□□□□□ -0.67
LRTM1-201ENST00000273286 RNF26Q9BY78 433 aaPredicted RBP10.88□□□□□ -0.67
LRTM1-201ENST00000273286 CARS2Q9HA77 564 aaKnown RBP10.88□□□□□ -0.67
LRTM1-201ENST00000273286 NRBP2Q9NSY0 501 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 ZNF318Q5VUA4 2279 aa10.88□□□□□ -0.67
LRTM1-201ENST00000273286 EVPLQ92817 2033 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 FNDC1Q4ZHG4 1894 aaPredicted RBP10.87□□□□□ -0.67
LRTM1-201ENST00000273286 LOC730098B7Z3J9 87 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 MGEA5O60502 916 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 CBX7O95931 251 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 HOXB8P17481 243 aaPredicted RBP10.87□□□□□ -0.67
LRTM1-201ENST00000273286 PSMA5P28066 241 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 JAK3P52333 1124 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 DUSP6Q16828 381 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 PRR16Q569H4 304 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 BLOC1S2Q6QNY1 142 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 TMEM184AQ6ZMB5 413 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 ADGRD2Q7Z7M1 963 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 RBM23Q86U06 439 aaKnown RBP10.87□□□□□ -0.67
LRTM1-201ENST00000273286 FAM228AQ86W67 206 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 FAM177A1Q8N128 213 aaPredicted RBP10.87□□□□□ -0.67
LRTM1-201ENST00000273286 COLGALT1Q8NBJ5 622 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 RDM1Q8NG50 284 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 MRPS27Q92552 414 aaKnown RBP10.87□□□□□ -0.67
LRTM1-201ENST00000273286 MRPL9Q9BYD2 267 aaKnown RBP10.87□□□□□ -0.67
LRTM1-201ENST00000273286 SH3GLB2Q9NR46 395 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 TYW1Q9NV66 732 aaKnown RBP10.87□□□□□ -0.67
LRTM1-201ENST00000273286 DACT1Q9NYF0 836 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 GABBR1Q9UBS5 961 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 MUTYHQ9UIF7 546 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 AKT3Q9Y243 479 aa10.87□□□□□ -0.67
LRTM1-201ENST00000273286 USP15Q9Y4E8 981 aaPredicted RBP10.87□□□□□ -0.67
LRTM1-201ENST00000273286 RBAK-RBAKDNI3L0D1 243 aa10.86□□□□□ -0.67
LRTM1-201ENST00000273286 GPR32O75388 356 aa10.86□□□□□ -0.67
LRTM1-201ENST00000273286 CSPG5O95196 566 aa10.86□□□□□ -0.67
LRTM1-201ENST00000273286 GLP2RO95838 553 aa10.86□□□□□ -0.67
LRTM1-201ENST00000273286 DAB2P98082 770 aa10.86□□□□□ -0.67
LRTM1-201ENST00000273286 EFCAB12Q6NXP0 572 aa10.86□□□□□ -0.67
LRTM1-201ENST00000273286 SUGP1Q8IWZ8 645 aaKnown RBP10.86□□□□□ -0.67
LRTM1-201ENST00000273286 BRF1Q92994 677 aa10.86□□□□□ -0.67
LRTM1-201ENST00000273286 ZNF558Q96NG5 402 aa10.86□□□□□ -0.67
LRTM1-201ENST00000273286 AGXT2Q9BYV1 514 aa10.86□□□□□ -0.67
LRTM1-201ENST00000273286 TJP2Q9UDY2 1190 aa10.86□□□□□ -0.67
LRTM1-201ENST00000273286 BARX2Q9UMQ3 279 aaPredicted RBP10.86□□□□□ -0.67
LRTM1-201ENST00000273286 TLR6Q9Y2C9 796 aa10.86□□□□□ -0.67
LRTM1-201ENST00000273286 PLXNA4Q9HCM2 1894 aa10.86□□□□□ -0.67
LRTM1-201ENST00000273286 C5orf42Q9H799 3197 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 ARID1BQ8NFD5 2236 aaPredicted RBP10.85□□□□□ -0.67
LRTM1-201ENST00000273286 EPB41L2O43491 1005 aaKnown RBP10.85□□□□□ -0.67
LRTM1-201ENST00000273286 REC8O95072 547 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 VTNP04004 478 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 FGFR1P11362 822 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 IFNAR1P17181 557 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 GATMP50440 423 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 DNM2P50570 870 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 NLRP11P59045 1033 aaKnown RBP10.85□□□□□ -0.67
LRTM1-201ENST00000273286 NHLH1Q02575 133 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 FZD5Q13467 585 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 TSNAXIP1Q2TAA8 658 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 FAM102BQ5T8I3 360 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 Q6ZUG5 572 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 CDH24Q86UP0 819 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 ZSWIM9Q86XI8 627 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 MRPL41Q8IXM3 137 aaKnown RBP10.85□□□□□ -0.67
LRTM1-201ENST00000273286 LINC01465Q8N7H1 131 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 SUSD6Q92537 303 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 JAKMIP1Q96N16 626 aaKnown RBP10.85□□□□□ -0.67
LRTM1-201ENST00000273286 SCLT1Q96NL6 688 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 TCF25Q9BQ70 676 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 INO80BQ9C086 356 aaPredicted RBP10.85□□□□□ -0.67
LRTM1-201ENST00000273286 CWH43Q9H720 699 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 CHST12Q9NRB3 414 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 STK39Q9UEW8 545 aa10.85□□□□□ -0.67
LRTM1-201ENST00000273286 CTNND2Q9UQB3 1225 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms