RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SHKBP1Q8TBC3 707 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 KCNG4Q8TDN1 519 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 SHDQ96IW2 340 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 ZSCAN31Q96LW9 406 aaPredicted RBP9.77□□□□□ -0.85
TPM3-201ENST00000271850 DRC1Q96MC2 740 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 IKZF4Q9H2S9 585 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 SEMA4AQ9H3S1 761 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 C17orf75Q9HAS0 396 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 BLOC1S4Q9NUP1 217 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 SLC38A7Q9NVC3 462 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 SPATA6Q9NWH7 488 aaPredicted RBP9.77□□□□□ -0.85
TPM3-201ENST00000271850 C2orf42Q9NWW7 574 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 AFF4Q9UHB7 1163 aaKnown RBP9.77□□□□□ -0.85
TPM3-201ENST00000271850 FBXO4Q9UKT5 387 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 NOL7Q9UMY1 257 aaKnown RBP9.77□□□□□ -0.85
TPM3-201ENST00000271850 RBM19Q9Y4C8 960 aaKnown RBP9.77□□□□□ -0.85
TPM3-201ENST00000271850 YIPF1Q9Y548 306 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 MYH11P35749 1972 aa9.77□□□□□ -0.85
TPM3-201ENST00000271850 LACTBL1A8MY62 500 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 TISP43B9A030 160 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 LAD1O00515 517 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 PRRG1O14668 218 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 MICAL2O94851 1124 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 OAZ2O95190 189 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 LRG1P02750 347 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 ADRB2P07550 413 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 PLA2G4BP0C869 781 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 MCM4P33991 863 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 RPS9P46781 194 aaKnown RBP9.76□□□□□ -0.85
TPM3-201ENST00000271850 FOXK2Q01167 660 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 PFKPQ01813 784 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 GNL2Q13823 731 aaKnown RBP9.76□□□□□ -0.85
TPM3-201ENST00000271850 TEAD2Q15562 447 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 ZRSR1Q15695 479 aaKnown RBP9.76□□□□□ -0.85
TPM3-201ENST00000271850 ENOX2Q16206 610 aaKnown RBP9.76□□□□□ -0.85
TPM3-201ENST00000271850 TPGS2Q68CL5 300 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 SCARA3Q6AZY7 606 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 ZNF280DQ6N043 979 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 ZPBP2Q6X784 338 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 DTHD1Q6ZMT9 781 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 RUBCNQ92622 972 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 PGLYRP2Q96PD5 576 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 BCO2Q9BYV7 579 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 ZNF334Q9HCZ1 680 aaPredicted RBP9.76□□□□□ -0.85
TPM3-201ENST00000271850 DLL3Q9NYJ7 618 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 ANK1P16157 1881 aa9.76□□□□□ -0.85
TPM3-201ENST00000271850 SCN1AP35498 2009 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 VWA3AA6NCI4 1184 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 LAMTOR5O43504 91 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 SOAT2O75908 522 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 PIGRP01833 764 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 NEFLP07196 543 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 CDR1P51861 262 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 ZNF131P52739 623 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 WNT7BP56706 349 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 DMWDQ09019 674 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 ZC3H14Q6PJT7 736 aaKnown RBP9.75□□□□□ -0.85
TPM3-201ENST00000271850 TXNDC11Q6PKC3 985 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 PDZD4Q76G19 769 aaPredicted RBP9.75□□□□□ -0.85
TPM3-201ENST00000271850 GPIHBP1Q8IV16 184 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 OR10T2Q8NGX3 314 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 ZSCAN18Q8TBC5 510 aaPredicted RBP9.75□□□□□ -0.85
TPM3-201ENST00000271850 DNASE1L2Q92874 299 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 SMARCD2Q92925 531 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 REEP2Q9BRK0 252 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 TCHPQ9BT92 498 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 TIPINQ9BVW5 301 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 EPC1Q9H2F5 836 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 CHRDQ9H2X0 955 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 TRPV4Q9HBA0 871 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 ZFP14Q9HCL3 533 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 PARD6AQ9NPB6 346 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 NUB1Q9Y5A7 615 aa9.75□□□□□ -0.85
TPM3-201ENST00000271850 KIF26AQ9ULI4 1882 aaPredicted RBP9.74□□□□□ -0.85
TPM3-201ENST00000271850 A0A1W2PRU2 124 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 MTMR11A4FU01 709 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 HEPACAM2A8MVW5 462 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 H7C4K7 107 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 CLDN3O15551 220 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 KINO60870 393 aaKnown RBP9.74□□□□□ -0.85
TPM3-201ENST00000271850 NFICP08651 508 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 CHRNB1P11230 501 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 MYL4P12829 197 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 GDI1P31150 447 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 ELF1P32519 619 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 SOX9P48436 509 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 DUSP4Q13115 394 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 SWT1Q5T5J6 900 aaKnown RBP9.74□□□□□ -0.85
TPM3-201ENST00000271850 ERICH6BQ5W0A0 696 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 CENPPQ6IPU0 288 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 ZNF852Q6ZMS4 543 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 GAREM2Q75VX8 874 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 HAUS6Q7Z4H7 955 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 APBB1IPQ7Z5R6 666 aaPredicted RBP9.74□□□□□ -0.85
TPM3-201ENST00000271850 ATAD1Q8NBU5 361 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 RIN3Q8TB24 985 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 CHFRQ96EP1 664 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 TMX3Q96JJ7 454 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 RAB34Q9BZG1 259 aa9.74□□□□□ -0.85
TPM3-201ENST00000271850 PLEKHA5Q9HAU0 1116 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms