RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 LVRNQ6Q4G3 990 aa29.06■■■□□ 2.24
CBX4-201ENST00000269397 STK32AQ8WU08 396 aa29.06■■■□□ 2.24
CBX4-201ENST00000269397 OSBPL1AQ9BXW6 950 aa29.06■■■□□ 2.24
CBX4-201ENST00000269397 DCTN4Q9UJW0 460 aa29.06■■■□□ 2.24
CBX4-201ENST00000269397 PRPF4O43172 522 aaKnown RBP eCLIP29.06■■■□□ 2.249e-7■■■■□ 22.3
CBX4-201ENST00000269397 IFNB1P01574 187 aa29.06■■■□□ 2.24
CBX4-201ENST00000269397 OVGP1Q12889 678 aa29.06■■■□□ 2.24
CBX4-201ENST00000269397 PTP4A2Q12974 167 aa29.06■■■□□ 2.24
CBX4-201ENST00000269397 LIN9Q5TKA1 542 aa29.06■■■□□ 2.24
CBX4-201ENST00000269397 TMEM270Q6UE05 265 aa29.06■■■□□ 2.24
CBX4-201ENST00000269397 MFSD7Q6UXD7 560 aa29.06■■■□□ 2.24
CBX4-201ENST00000269397 GPD1LQ8N335 351 aa29.06■■■□□ 2.24
CBX4-201ENST00000269397 UBN1Q9NPG3 1134 aa29.06■■■□□ 2.24
CBX4-201ENST00000269397 DCTN3O75935 186 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 PDHA1P08559 390 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 TNNI1P19237 187 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 GAD2Q05329 585 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 C4orf19Q8IY42 314 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 OGFOD1Q8N543 542 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 EXD1Q8NHP7 514 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 TRIM11Q96F44 468 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 FBXL18Q96ME1 805 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 YIPF3Q9GZM5 350 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 HERC5Q9UII4 1024 aaKnown RBP29.05■■■□□ 2.24
CBX4-201ENST00000269397 UBIAD1Q9Y5Z9 338 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 ZNF536O15090 1300 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 ATP5HO75947 161 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 KRT4P19013 534 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 PSMC5P62195 406 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 MTDHQ86UE4 582 aaKnown RBP29.05■■■□□ 2.24
CBX4-201ENST00000269397 TAAR1Q96RJ0 339 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 DENND2DQ9H6A0 471 aaPredicted RBP29.05■■■□□ 2.24
CBX4-201ENST00000269397 C10orf88Q9H8K7 445 aa29.05■■■□□ 2.24
CBX4-201ENST00000269397 LYPLA2O95372 231 aa29.04■■■□□ 2.24
CBX4-201ENST00000269397 PDIA2Q13087 525 aaKnown RBP29.04■■■□□ 2.24
CBX4-201ENST00000269397 PLEKHG4Q58EX7 1191 aa29.04■■■□□ 2.24
CBX4-201ENST00000269397 ALG13Q9NP73 1137 aaKnown RBP29.04■■■□□ 2.24
CBX4-201ENST00000269397 GOLGA8RI6L899 631 aa29.04■■■□□ 2.24
CBX4-201ENST00000269397 PLCB3Q01970 1234 aa29.04■■■□□ 2.24
CBX4-201ENST00000269397 NR1H3Q13133 447 aa29.04■■■□□ 2.24
CBX4-201ENST00000269397 MAPK6Q16659 721 aa29.04■■■□□ 2.24
CBX4-201ENST00000269397 CCDC125Q86Z20 511 aa29.04■■■□□ 2.24
CBX4-201ENST00000269397 CLEC4DQ8WXI8 215 aa29.04■■■□□ 2.24
CBX4-201ENST00000269397 ZNF75CPQ92670 426 aaPredicted RBP29.04■■■□□ 2.24
CBX4-201ENST00000269397 KLF6Q99612 283 aaPredicted RBP29.04■■■□□ 2.24
CBX4-201ENST00000269397 ENO4A6NNW6 628 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 HLA-DRAP01903 254 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 PCK1P35558 622 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 NOMO3P69849 1222 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 BRDTQ58F21 947 aaPredicted RBP29.03■■■□□ 2.24
CBX4-201ENST00000269397 WDR44Q5JSH3 913 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 CDCA2Q69YH5 1023 aaPredicted RBP29.03■■■□□ 2.24
CBX4-201ENST00000269397 TXNRD3NBQ6F5E7 133 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 NLRP9Q7RTR0 991 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 TMEM121Q9BTD3 319 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 MOV10L1Q9BXT6 1211 aaKnown RBP29.03■■■□□ 2.24
CBX4-201ENST00000269397 ZFP69BQ9UJL9 534 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 CORO1CQ9ULV4 474 aaPredicted RBP29.03■■■□□ 2.24
CBX4-201ENST00000269397 PCDHB4Q9Y5E5 795 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 PIK3CAP42336 1068 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 ACOT2P49753 483 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 ENOSF1Q7L5Y1 443 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 USP37Q86T82 979 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 INPP5DQ92835 1189 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 MASTLQ96GX5 879 aa29.03■■■□□ 2.24
CBX4-201ENST00000269397 SMG5Q9UPR3 1016 aaKnown RBP29.03■■■□□ 2.24
CBX4-201ENST00000269397 PTPRJQ12913 1337 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 TYROBPO43914 113 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 KRT1P04264 644 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 ADRA1DP25100 572 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 GTF2H1P32780 548 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 SESN3P58005 492 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 DGKZQ13574 1117 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 FAM160B2Q86V87 743 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 SYNPO2Q9UMS6 1093 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 IVNS1ABPQ9Y6Y0 642 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 TESPA1A2RU30 521 aaPredicted RBP29.02■■■□□ 2.24
CBX4-201ENST00000269397 LINGO3P0C6S8 592 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 GNA15P30679 374 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 CAP2P40123 477 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 TDRD10Q5VZ19 366 aaKnown RBP29.02■■■□□ 2.24
CBX4-201ENST00000269397 RFWD3Q6PCD5 774 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 NLRX1Q86UT6 975 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 CEP170P1Q96L14 293 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 SAE1Q9UBE0 346 aaPredicted RBP29.02■■■□□ 2.24
CBX4-201ENST00000269397 FEM1BQ9UK73 627 aa29.02■■■□□ 2.24
CBX4-201ENST00000269397 ICAM1P05362 532 aa29.01■■■□□ 2.24
CBX4-201ENST00000269397 PTDSS1P48651 473 aaKnown RBP29.01■■■□□ 2.24
CBX4-201ENST00000269397 SP4Q02446 784 aa29.01■■■□□ 2.24
CBX4-201ENST00000269397 GRIK3Q13003 919 aa29.01■■■□□ 2.24
CBX4-201ENST00000269397 SCARA3Q6AZY7 606 aa29.01■■■□□ 2.24
CBX4-201ENST00000269397 SLITRK1Q96PX8 696 aa29.01■■■□□ 2.24
CBX4-201ENST00000269397 RAVER2Q9HCJ3 691 aaKnown RBP29.01■■■□□ 2.24
CBX4-201ENST00000269397 MRPL47Q9HD33 250 aaKnown RBP29.01■■■□□ 2.24
CBX4-201ENST00000269397 LUC7L3O95232 432 aaKnown RBP29.01■■■□□ 2.23
CBX4-201ENST00000269397 SSTR1P30872 391 aa29.01■■■□□ 2.23
CBX4-201ENST00000269397 MCCD1P59942 119 aaPredicted RBP29.01■■■□□ 2.23
CBX4-201ENST00000269397 ANO7Q6IWH7 933 aa29.01■■■□□ 2.23
CBX4-201ENST00000269397 TDRPQ86YL5 185 aa29.01■■■□□ 2.23
CBX4-201ENST00000269397 ALLCQ8N6M5 410 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms