RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ATXN2Q99700 1313 aaKnown RBP13.7□□□□□ -0.22
CPSF6-201ENST00000266679 PSTPIP1O43586 416 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 MAFO75444 373 aaPredicted RBP13.7□□□□□ -0.22
CPSF6-201ENST00000266679 SRGAP2CP0DJJ0 459 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 EDNRBP24530 442 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 PTP4A2Q12974 167 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 NEDD9Q14511 834 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 SPATS2Q86XZ4 545 aaKnown RBP13.7□□□□□ -0.22
CPSF6-201ENST00000266679 PHF13Q86YI8 300 aaPredicted RBP13.7□□□□□ -0.22
CPSF6-201ENST00000266679 RHOT1Q8IXI2 618 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 ANKRD13AQ8IZ07 590 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 LRRC71Q8N4P6 559 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.7□□□□□ -0.22
CPSF6-201ENST00000266679 OPTNQ96CV9 577 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 SNF8Q96H20 258 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 CDC42EP4Q9H3Q1 356 aaKnown RBP13.7□□□□□ -0.22
CPSF6-201ENST00000266679 MRPL47Q9HD33 250 aaKnown RBP13.7□□□□□ -0.22
CPSF6-201ENST00000266679 SCINQ9Y6U3 715 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 MGAMO43451 1857 aa13.69□□□□□ -0.22
CPSF6-201ENST00000266679 TLR3O15455 904 aaKnown RBP13.69□□□□□ -0.22
CPSF6-201ENST00000266679 ACSL3O95573 720 aa13.69□□□□□ -0.22
CPSF6-201ENST00000266679 CST3P01034 146 aaPredicted RBP13.69□□□□□ -0.22
CPSF6-201ENST00000266679 ATF2P15336 505 aa13.69□□□□□ -0.22
CPSF6-201ENST00000266679 CHN1P15882 459 aa13.69□□□□□ -0.22
CPSF6-201ENST00000266679 BRD2P25440 801 aaKnown RBP13.69□□□□□ -0.22
CPSF6-201ENST00000266679 ITGA8P53708 1063 aa13.69□□□□□ -0.22
CPSF6-201ENST00000266679 TTC31Q49AM3 519 aaPredicted RBP13.69□□□□□ -0.22
CPSF6-201ENST00000266679 RNF187Q5TA31 235 aaPredicted RBP13.69□□□□□ -0.22
CPSF6-201ENST00000266679 PLEKHA7Q6IQ23 1121 aa13.69□□□□□ -0.22
CPSF6-201ENST00000266679 SCARA5Q6ZMJ2 495 aa13.69□□□□□ -0.22
CPSF6-201ENST00000266679 REM2Q8IYK8 340 aaPredicted RBP13.69□□□□□ -0.22
CPSF6-201ENST00000266679 GRK7Q8WTQ7 553 aa13.69□□□□□ -0.22
CPSF6-201ENST00000266679 SEPT1Q8WYJ6 367 aa13.69□□□□□ -0.22
CPSF6-201ENST00000266679 ZNF668Q96K58 619 aaPredicted RBP13.69□□□□□ -0.22
CPSF6-201ENST00000266679 XPO6Q96QU8 1125 aaKnown RBP13.69□□□□□ -0.22
CPSF6-201ENST00000266679 MRPL4Q9BYD3 311 aaKnown RBP13.69□□□□□ -0.22
CPSF6-201ENST00000266679 FAM129AQ9BZQ8 928 aa13.69□□□□□ -0.22
CPSF6-201ENST00000266679 AAASQ9NRG9 546 aa13.69□□□□□ -0.22
CPSF6-201ENST00000266679 CNTN6Q9UQ52 1028 aa13.69□□□□□ -0.22
CPSF6-201ENST00000266679 RASGRF2O14827 1237 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 TP73O15350 636 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 MEFVO15553 781 aaPredicted RBP13.68□□□□□ -0.22
CPSF6-201ENST00000266679 ARIH2O95376 493 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 GAS8O95995 478 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 PRKCBP05771 671 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 MAN1A1P33908 653 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 MYL6P60660 151 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 IRX3P78415 501 aaPredicted RBP13.68□□□□□ -0.22
CPSF6-201ENST00000266679 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
CPSF6-201ENST00000266679 ZNF394Q53GI3 561 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 C6orf118Q5T5N4 469 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 METTL7BQ6UX53 244 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 ZPBP2Q6X784 338 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 PACS2Q86VP3 889 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 IFNL1Q8IU54 200 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 WDR49Q8IV35 697 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 OTUD6BQ8N6M0 293 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 UBR7Q8N806 425 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 FEZF2Q8TBJ5 459 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 CCDC113Q9H0I3 377 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 CSADQ9Y600 493 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 ZSWIM8A7E2V4 1837 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 ANK1P16157 1881 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 MCM3APO60318 1980 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 PI4K2BG5E9Z4 385 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 GPR25O00155 361 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 FAM189A1O60320 539 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 MSCO60682 206 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 ASS1P00966 412 aaKnown RBP13.68□□□□□ -0.22
CPSF6-201ENST00000266679 AGTP01019 485 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 PGK2P07205 417 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 ZNF132P52740 706 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 LAMTOR4Q0VGL1 99 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 IFT88Q13099 833 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 CCDC38Q502W7 563 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 RHBDF2Q6PJF5 856 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 SYDE1Q6ZW31 735 aaPredicted RBP13.68□□□□□ -0.22
CPSF6-201ENST00000266679 ANKS1BQ7Z6G8 1248 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 ZBTB8OSQ8IWT0 167 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 KATNAL2Q8IYT4 538 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 ZNF606Q8WXB4 792 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 VCPIP1Q96JH7 1222 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 SCLT1Q96NL6 688 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 OSBPL8Q9BZF1 889 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 ADAM7Q9H2U9 754 aa13.68□□□□□ -0.22
CPSF6-201ENST00000266679 DDX20Q9UHI6 824 aaKnown RBP13.68□□□□□ -0.22
CPSF6-201ENST00000266679 MANSC4A6NHS7 340 aaPredicted RBP13.67□□□□□ -0.22
CPSF6-201ENST00000266679 TOM1L1O75674 476 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 ITIH2P19823 946 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 ADCY8P40145 1251 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 EFNA5P52803 228 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 RPL7AP62424 266 aaKnown RBP13.67□□□□□ -0.22
CPSF6-201ENST00000266679 KLF1Q13351 362 aaPredicted RBP13.67□□□□□ -0.22
CPSF6-201ENST00000266679 LONRF1Q17RB8 773 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 ZFYVE27Q5T4F4 411 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 IER5Q5VY09 327 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 TRMT10CQ7L0Y3 403 aaKnown RBP13.67□□□□□ -0.22
CPSF6-201ENST00000266679 RNF149Q8NC42 400 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 FAM167AQ96KS9 214 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms