RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 OSCP1Q8WVF1 389 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 GRIP2Q9C0E4 1043 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 CCDC162PA2VCL2 907 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 TEX28O15482 410 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 PRKAB2O43741 272 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 PLEKHA8P1O95397 391 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 GRK2P25098 689 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 CDC25AP30304 524 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 RECQLP46063 649 aaPredicted RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 VCPP55072 806 aaKnown RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 EFTUD2Q15029 972 aaKnown RBP eCLIP5.97□□□□□ -1.45
VCAN-201ENST00000265077 CLEC4GQ6UXB4 293 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 BTNL9Q6UXG8 535 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 CHCHD4Q8N4Q1 142 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 MCUQ8NE86 351 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 SLC10A4Q96EP9 437 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 RHOBTB2Q9BYZ6 727 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 STK32BQ9NY57 414 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 AIPL1Q9NZN9 384 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 CSADQ9Y600 493 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 TPPPO94811 219 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 SERPINB2P05120 415 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 ENO2P09104 434 aaPredicted RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 AKR1D1P51857 326 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 BNIP1Q12981 228 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 AENQ8WTP8 325 aaKnown RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 COA7Q96BR5 231 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 TMBIM4Q9HC24 238 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 KIF17Q9P2E2 1029 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 GJA3Q9Y6H8 435 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 ALKQ9UM73 1620 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 GOLGA8MH3BSY2 632 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 PGM3O95394 542 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 BCL10O95999 233 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 SOX5P35711 763 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 FNTAP49354 379 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 CHN2P52757 468 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 YWHAHQ04917 246 aaPredicted RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 AASDHQ4L235 1098 aaPredicted RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 METTL16Q86W50 562 aaKnown RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 FAM167AQ96KS9 214 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 TTC7AQ9ULT0 858 aaPredicted RBP5.97□□□□□ -1.45
VCAN-201ENST00000265077 AK5Q9Y6K8 562 aa5.97□□□□□ -1.45
VCAN-201ENST00000265077 FAM47DPA6NHR8 397 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 TKTP29401 623 aaKnown RBP5.96□□□□□ -1.45
VCAN-201ENST00000265077 VAMP7P51809 220 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 PADI6Q6TGC4 694 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 SETD3Q86TU7 594 aaPredicted RBP5.96□□□□□ -1.45
VCAN-201ENST00000265077 ARHGEF1Q92888 912 aaKnown RBP5.96□□□□□ -1.45
VCAN-201ENST00000265077 FUCA2Q9BTY2 467 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 ISCUQ9H1K1 167 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 CPSF3Q9UKF6 684 aaKnown RBP5.96□□□□□ -1.45
VCAN-201ENST00000265077 ERBB3P21860 1342 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 POTEMA6NI47 508 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 ZBTB5O15062 677 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 MCAMP43121 646 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 IL1RL1Q01638 556 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 FAM193BQ96PV7 902 aaPredicted RBP5.96□□□□□ -1.45
VCAN-201ENST00000265077 MRPS26Q9BYN8 205 aaKnown RBP5.96□□□□□ -1.45
VCAN-201ENST00000265077 C12orf4Q9NQ89 552 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 C8orf4Q9NR00 106 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 MRPL39Q9NYK5 338 aaKnown RBP5.96□□□□□ -1.45
VCAN-201ENST00000265077 ZNF212Q9UDV6 495 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 RSL24D1Q9UHA3 163 aaKnown RBP5.96□□□□□ -1.45
VCAN-201ENST00000265077 KLHL20Q9Y2M5 609 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 TEX33O43247 280 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 FTLP02792 175 aaPredicted RBP5.96□□□□□ -1.45
VCAN-201ENST00000265077 USP11P51784 963 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 SLC18A3Q16572 532 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 TMEM179Q6ZVK1 233 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 CYFIP1Q7L576 1253 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 SCUBE1Q8IWY4 988 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 ATP8B4Q8TF62 1192 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 VMP1Q96GC9 406 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 OSBPL8Q9BZF1 889 aa5.96□□□□□ -1.45
VCAN-201ENST00000265077 EML4Q9HC35 981 aaKnown RBP5.96□□□□□ -1.45
VCAN-201ENST00000265077 RPL26L1Q9UNX3 145 aaKnown RBP5.96□□□□□ -1.45
VCAN-201ENST00000265077 DLC1Q96QB1 1528 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 A0A1W2PQJ5 194 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 MTRF1O75570 445 aaKnown RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 SRGAP2CP0DJJ0 459 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 KYNUQ16719 465 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 HDDC2Q7Z4H3 204 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 TATDN2Q93075 761 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 ORAI2Q96SN7 254 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 FSD1LQ9BXM9 530 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 MBD2Q9UBB5 411 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 FADS3Q9Y5Q0 445 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 PDS5AQ29RF7 1337 aaKnown RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 USP17L8P0C7I0 530 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 NLRP11P59045 1033 aaKnown RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 HEXIM2Q96MH2 286 aaKnown RBP5.96□□□□□ -1.46
VCAN-201ENST00000265077 TSSK1BQ9BXA7 367 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 CEP44Q9C0F1 390 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 ADA2Q9NZK5 511 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 UVRAGQ9P2Y5 699 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 TRIM49BA6NDI0 452 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 K7ERI5 159 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 MGRN1O60291 552 aa5.96□□□□□ -1.46
VCAN-201ENST00000265077 HSPA2P54652 639 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms