RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 KIAA1217Q5T5P2 1943 aa9.9□□□□□ -0.82
SSR3-201ENST00000265044 COL11A1P12107 1806 aaPredicted RBP9.9□□□□□ -0.83
SSR3-201ENST00000265044 DOCK3Q8IZD9 2030 aa9.9□□□□□ -0.83
SSR3-201ENST00000265044 ZRANB2O95218 330 aaKnown RBP eCLIP9.9□□□□□ -0.83
SSR3-201ENST00000265044 IFNB1P01574 187 aa9.9□□□□□ -0.83
SSR3-201ENST00000265044 FAM102AQ5T9C2 384 aaPredicted RBP9.9□□□□□ -0.83
SSR3-201ENST00000265044 CDCA2Q69YH5 1023 aaPredicted RBP9.9□□□□□ -0.83
SSR3-201ENST00000265044 EFCAB13Q8IY85 973 aa9.9□□□□□ -0.83
SSR3-201ENST00000265044 MCEEQ96PE7 176 aa9.9□□□□□ -0.83
SSR3-201ENST00000265044 LRRC1Q9BTT6 524 aa9.9□□□□□ -0.83
SSR3-201ENST00000265044 HAPLN2Q9GZV7 340 aa9.9□□□□□ -0.83
SSR3-201ENST00000265044 ZWILCHQ9H900 591 aa9.9□□□□□ -0.83
SSR3-201ENST00000265044 APOBEC3GQ9HC16 384 aaKnown RBP9.9□□□□□ -0.83
SSR3-201ENST00000265044 PCSK1NQ9UHG2 260 aa9.9□□□□□ -0.83
SSR3-201ENST00000265044 LRFN2Q9ULH4 789 aa9.9□□□□□ -0.83
SSR3-201ENST00000265044 PTPRJQ12913 1337 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 CNTNAP2Q9UHC6 1331 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 CCDC151A5D8V7 595 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 ZBTB42B2RXF5 422 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 B4GALT4O60513 344 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 HSF2BPO75031 334 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 GRAP2O75791 330 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 MYBL1P10243 752 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 KRT3P12035 628 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 WNT7BP56706 349 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 CACNB2Q08289 660 aaPredicted RBP9.89□□□□□ -0.83
SSR3-201ENST00000265044 CLEC16AQ2KHT3 1053 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 SLC10A6Q3KNW5 377 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 SPOUT1Q5T280 376 aaKnown RBP9.89□□□□□ -0.83
SSR3-201ENST00000265044 GSPT2Q8IYD1 628 aaKnown RBP9.89□□□□□ -0.83
SSR3-201ENST00000265044 LMO3Q8TAP4 145 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 EMID1Q96A84 441 aaPredicted RBP9.89□□□□□ -0.83
SSR3-201ENST00000265044 PCDHB18PQ96TA0 734 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.89□□□□□ -0.834e-7■□□□□ 9.2
SSR3-201ENST00000265044 SMYD3Q9H7B4 428 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 LRRC4Q9HBW1 653 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 ABCB6Q9NP58 842 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 RBM12Q9NTZ6 932 aaKnown RBP9.89□□□□□ -0.83
SSR3-201ENST00000265044 STRIP2Q9ULQ0 834 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 RBAK-RBAKDNI3L0D1 243 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 VNN1O95497 513 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 HMGCRP04035 888 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 EDN1P05305 212 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 HOXC6P09630 235 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 CRYBB1P53674 252 aaPredicted RBP9.89□□□□□ -0.83
SSR3-201ENST00000265044 DYNLT1P63172 113 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 C1orf127Q8N9H9 656 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 ARRDC4Q8NCT1 418 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 TTC16Q8NEE8 873 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 GAD1Q99259 594 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 CALN1Q9BXU9 219 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 ITGA11Q9UKX5 1188 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 ST3GAL5Q9UNP4 418 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 TRPV2Q9Y5S1 764 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 STYXL1Q9Y6J8 313 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 A0A1B0GUA9 196 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 B3GAT3O94766 335 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 LCA5LO95447 670 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 KRT1P04264 644 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 IQCF3P0C7M6 154 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 CCND3P30281 292 aaPredicted RBP9.89□□□□□ -0.83
SSR3-201ENST00000265044 TAF6P49848 677 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 NDST1P52848 882 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 MRPS6P82932 125 aaKnown RBP9.89□□□□□ -0.83
SSR3-201ENST00000265044 PURAQ00577 322 aaKnown RBP9.89□□□□□ -0.83
SSR3-201ENST00000265044 PTPN11Q06124 597 aaPredicted RBP9.89□□□□□ -0.83
SSR3-201ENST00000265044 CLUL1Q15846 466 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 FBXO47Q5MNV8 452 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 MEI1Q5TIA1 1274 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 METTL23Q86XA0 190 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 NME8Q8N427 588 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 TTC39CQ8N584 583 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 RNF34Q969K3 372 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 KLHL11Q9NVR0 708 aa9.89□□□□□ -0.83
SSR3-201ENST00000265044 DICER1Q9UPY3 1922 aaKnown RBP9.88□□□□□ -0.83
SSR3-201ENST00000265044 RBM47A0AV96 593 aaKnown RBP9.88□□□□□ -0.83
SSR3-201ENST00000265044 CCDC66A2RUB6 948 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 GJB6O95452 261 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 AXLP30530 894 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 GNL1P36915 607 aaPredicted RBP9.88□□□□□ -0.83
SSR3-201ENST00000265044 VSNL1P62760 191 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 MCOLN2Q8IZK6 566 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 UBLCP1Q8WVY7 318 aaPredicted RBP9.88□□□□□ -0.83
SSR3-201ENST00000265044 TMEM176AQ96HP8 235 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 WNT8AQ9H1J5 351 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 RNF186Q9NXI6 227 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 STIM2Q9P246 746 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 AMACRQ9UHK6 382 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 PCDHGC5Q9Y5F6 944 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 MYADML2A6NDP7 307 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 ADCY6O43306 1168 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 FKTNO75072 461 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 POMCP01189 267 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 ATICP31939 592 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 ARPP19P56211 112 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 ATP11AP98196 1134 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 POU5F1BQ06416 359 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 ITGA7Q13683 1181 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 ZNF662Q6ZS27 426 aa9.88□□□□□ -0.83
SSR3-201ENST00000265044 LPPQ93052 612 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms