RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 WDR37Q9Y2I8 494 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 DAGLAQ9Y4D2 1042 aa13.86□□□□□ -0.19
NUP54-201ENST00000264883 GOLGB1Q14789 3259 aaKnown RBP13.85□□□□□ -0.19
NUP54-201ENST00000264883 FAM13AO94988 1023 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 SREBF1P36956 1147 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 RGS2P41220 211 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 GRIA2P42262 883 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 ITGA8P53708 1063 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 MAP3K10Q02779 954 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 CDC16Q13042 620 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 NR1H3Q13133 447 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 SIX1Q15475 284 aaPredicted RBP13.85□□□□□ -0.19
NUP54-201ENST00000264883 QRICH1Q2TAL8 776 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 PLEKHG4Q58EX7 1191 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 TTBK2Q6IQ55 1244 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 TRABD2AQ86V40 505 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 ARHGAP24Q8N264 748 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 C12orf50Q8NA57 414 aaPredicted RBP13.85□□□□□ -0.19
NUP54-201ENST00000264883 DNAJC1Q96KC8 554 aaKnown RBP13.85□□□□□ -0.19
NUP54-201ENST00000264883 INTS2Q9H0H0 1204 aaKnown RBP13.85□□□□□ -0.19
NUP54-201ENST00000264883 TUFT1Q9NNX1 390 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 NDE1Q9NXR1 346 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 TAS2R14Q9NYV8 317 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 TAS2R1Q9NYW7 299 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 KCND2Q9NZV8 630 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 NDUFA13Q9P0J0 144 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
NUP54-201ENST00000264883 RBM47A0AV96 593 aaKnown RBP13.85□□□□□ -0.19
NUP54-201ENST00000264883 DPEP1P16444 411 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 RPA3P35244 121 aaPredicted RBP13.85□□□□□ -0.19
NUP54-201ENST00000264883 PGM1P36871 562 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 ADARP55265 1226 aaKnown RBP13.85□□□□□ -0.19
NUP54-201ENST00000264883 FKBP1AP62942 108 aaKnown RBP13.85□□□□□ -0.19
NUP54-201ENST00000264883 TMED1Q13445 227 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 ITGA9Q13797 1035 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 DUS1LQ6P1R4 473 aaKnown RBP13.85□□□□□ -0.19
NUP54-201ENST00000264883 PHLDB2Q86SQ0 1253 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 MAP7D3Q8IWC1 876 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 SLCO2A1Q92959 643 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 SMC6Q96SB8 1091 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 AGPAT1Q99943 283 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 PLVAPQ9BX97 442 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 GPR88Q9GZN0 384 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 MAF1Q9H063 256 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 TRABDQ9H4I3 376 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 EBF3Q9H4W6 596 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 DNAJC18Q9H819 358 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 KCNQ5Q9NR82 932 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 ANKFY1Q9P2R3 1169 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 HEY2Q9UBP5 337 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 TUBGCP4Q9UGJ1 667 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 SH3GLB1Q9Y371 365 aa13.85□□□□□ -0.19
NUP54-201ENST00000264883 USP17L15C9J2P7 530 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 USP17L13C9JLJ4 530 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 USP17L11C9JVI0 530 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 USP17L18D6R9N7 530 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 USP17L22D6RA61 530 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 USP17L17D6RBQ6 530 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 USP17L19D6RCP7 530 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 USP17L20D6RJB6 530 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 F8W8V4 182 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 P4HA2O15460 535 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 SUPT3HO75486 399 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 OR6B1O95007 311 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 HLA-DOAP06340 250 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 VIL1P09327 827 aaKnown RBP13.84□□□□□ -0.19
NUP54-201ENST00000264883 ESRRAP11474 423 aaPredicted RBP13.84□□□□□ -0.19
NUP54-201ENST00000264883 HARSP12081 509 aaKnown RBP13.84□□□□□ -0.19
NUP54-201ENST00000264883 SLC18A1P54219 525 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 PSMC6P62333 389 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 GPC5P78333 572 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 MYL7Q01449 175 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 USP17L24Q0WX57 530 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 CETN1Q12798 172 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 PRR16Q569H4 304 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 USP17L6PQ6QN14 398 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 SLC9A9Q8IVB4 645 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 SNRNP27Q8WVK2 155 aaKnown RBP13.84□□□□□ -0.19
NUP54-201ENST00000264883 IRGQQ8WZA9 623 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 ZNF75CPQ92670 426 aaPredicted RBP13.84□□□□□ -0.19
NUP54-201ENST00000264883 FAM161BQ96MY7 647 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 PWWP2AQ96N64 755 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 BHMT2Q9H2M3 363 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 LRRC19Q9H756 370 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 DMAC2Q9NW81 257 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 ANAPC5Q9UJX4 755 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 SMG5Q9UPR3 1016 aaKnown RBP13.84□□□□□ -0.19
NUP54-201ENST00000264883 ADAMTSL1Q8N6G6 1762 aa13.84□□□□□ -0.19
NUP54-201ENST00000264883 MEIS2O14770 477 aa13.83□□□□□ -0.19
NUP54-201ENST00000264883 CLIC2O15247 247 aa13.83□□□□□ -0.19
NUP54-201ENST00000264883 BAG2O95816 211 aa13.83□□□□□ -0.19
NUP54-201ENST00000264883 GAS8O95995 478 aa13.83□□□□□ -0.19
NUP54-201ENST00000264883 COMTP21964 271 aa13.83□□□□□ -0.19
NUP54-201ENST00000264883 CA4P22748 312 aa13.83□□□□□ -0.19
NUP54-201ENST00000264883 EIF6P56537 245 aaKnown RBP13.83□□□□□ -0.19
NUP54-201ENST00000264883 AP2B1P63010 937 aa13.83□□□□□ -0.19
NUP54-201ENST00000264883 PLOD1Q02809 727 aaPredicted RBP13.83□□□□□ -0.19
NUP54-201ENST00000264883 CAV1Q03135 178 aa13.83□□□□□ -0.19
NUP54-201ENST00000264883 SLC1A5Q15758 541 aa13.83□□□□□ -0.19
NUP54-201ENST00000264883 DACT2Q5SW24 774 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms