RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 FUKQ8N0W3 1084 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 CICQ96RK0 1608 aaPredicted RBP20.91■□□□□ 0.94
CSPG5-201ENST00000264723 ADORA2BP29275 332 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 FKBP1AP62942 108 aaKnown RBP20.91■□□□□ 0.94
CSPG5-201ENST00000264723 CFAP157Q5JU67 520 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 LMNTD2Q8IXW0 634 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 MORC4Q8TE76 937 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 PRCCQ92733 491 aaPredicted RBP20.91■□□□□ 0.94
CSPG5-201ENST00000264723 RBM41Q96IZ5 413 aaKnown RBP20.91■□□□□ 0.94
CSPG5-201ENST00000264723 COL14A1Q05707 1796 aaKnown RBP20.91■□□□□ 0.94
CSPG5-201ENST00000264723 EDIL3O43854 480 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 CALB1P05937 261 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 CYP3A4P08684 503 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 ETS1P14921 441 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 TARSP26639 723 aaKnown RBP20.91■□□□□ 0.94
CSPG5-201ENST00000264723 DSG3P32926 999 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 PSMC4P43686 418 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 CCDC14Q49A88 953 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 CHST13Q8NET6 341 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.91■□□□□ 0.94
CSPG5-201ENST00000264723 NAALADL1Q9UQQ1 740 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 RIPK3Q9Y572 518 aa20.91■□□□□ 0.94
CSPG5-201ENST00000264723 EXTL3O43909 919 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 GZMAP12544 262 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 LGSNQ5TDP6 509 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 KREMEN1Q96MU8 473 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 PARVAQ9NVD7 372 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 PHRF1Q9P1Y6 1649 aaKnown RBP20.9■□□□□ 0.94
CSPG5-201ENST00000264723 G3BP2Q9UN86 482 aaKnown RBP20.9■□□□□ 0.94
CSPG5-201ENST00000264723 LRP6O75581 1613 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 SLIT2O94813 1529 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 KRT3P12035 628 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 DRP2Q13474 957 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 RRP1BQ14684 758 aaKnown RBP20.9■□□□□ 0.94
CSPG5-201ENST00000264723 PDCD7Q8N8D1 485 aaKnown RBP20.9■□□□□ 0.94
CSPG5-201ENST00000264723 HIPK4Q8NE63 616 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 SMARCAD1Q9H4L7 1026 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 ABT1Q9ULW3 272 aaKnown RBP20.9■□□□□ 0.94
CSPG5-201ENST00000264723 DNM1LO00429 736 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 CES2O00748 559 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 XPOTO43592 962 aaKnown RBP20.9■□□□□ 0.94
CSPG5-201ENST00000264723 PDGFRBP09619 1106 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 TSNAXIP1Q2TAA8 658 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 ATF7IP2Q5U623 682 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 GPAT2Q6NUI2 795 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 CCDC60Q8IWA6 550 aaPredicted RBP20.9■□□□□ 0.94
CSPG5-201ENST00000264723 FAM49BQ9NUQ9 324 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 NUP188Q5SRE5 1749 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 ALS2Q96Q42 1657 aa20.9■□□□□ 0.94
CSPG5-201ENST00000264723 ZBED1O96006 694 aa20.89■□□□□ 0.94
CSPG5-201ENST00000264723 FMO1Q01740 532 aa20.89■□□□□ 0.94
CSPG5-201ENST00000264723 TXLNGQ9NUQ3 528 aa20.89■□□□□ 0.94
CSPG5-201ENST00000264723 MARCOQ9UEW3 520 aaPredicted RBP20.89■□□□□ 0.94
CSPG5-201ENST00000264723 CHMP2BQ9UQN3 213 aa20.89■□□□□ 0.94
CSPG5-201ENST00000264723 PPFIA2O75334 1257 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 FNTAP49354 379 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 AUHQ13825 339 aaKnown RBP20.89■□□□□ 0.93
CSPG5-201ENST00000264723 FAXCQ5TGI0 409 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 FAF2Q96CS3 445 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 OSBPL7Q9BZF2 842 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 IP6K2Q9UHH9 426 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 NUP98P52948 1817 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 FAM47DPA6NHR8 397 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 TXNDC9O14530 226 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 CST8O60676 142 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 CSPG5O95196 566 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 TTC4O95801 387 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 MXD4Q14582 209 aaPredicted RBP20.89■□□□□ 0.93
CSPG5-201ENST00000264723 HIF1AQ16665 826 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 DLK2Q6UY11 383 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 SIAH1Q8IUQ4 282 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 EMC1Q8N766 993 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 SREK1Q8WXA9 508 aaKnown RBP20.89■□□□□ 0.93
CSPG5-201ENST00000264723 CYTH2Q99418 400 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 UBN1Q9NPG3 1134 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 TRIM33Q9UPN9 1127 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 CCDC160A6NGH7 325 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 ASB14A6NK59 587 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 DRD4P21917 467 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 ARPP19P56211 112 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 ARL4CP56559 192 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 NLRP11P59045 1033 aaKnown RBP20.89■□□□□ 0.93
CSPG5-201ENST00000264723 GLRA4Q5JXX5 417 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 DCAF12L1Q5VU92 463 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 C9orf131Q5VYM1 1079 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 KCTD17Q8N5Z5 321 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 DTX3LQ8TDB6 740 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 NSMCE1Q8WV22 266 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 STAMBPL1Q96FJ0 436 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 PCDHA3Q9Y5H8 950 aa20.89■□□□□ 0.93
CSPG5-201ENST00000264723 IGLV3-22A0A075B6J6 115 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 A8MXQ7 604 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 SKAP2O75563 359 aaPredicted RBP20.88■□□□□ 0.93
CSPG5-201ENST00000264723 CYP2B6P20813 491 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 CYP24A1Q07973 514 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 SLC20A2Q08357 652 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 KIF22Q14807 665 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 ERMARDQ5T6L9 678 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 XRRA1Q6P2D8 792 aa20.88■□□□□ 0.93
CSPG5-201ENST00000264723 C3orf62Q6ZUJ4 267 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms