RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 BTNL10A8MVZ5 291 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 DGKIO75912 1065 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 UFL1O94874 794 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 CD19P15391 556 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 SAT1P21673 171 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 POU5F1Q01860 360 aaKnown RBP17.12■□□□□ 0.33
GPC1-201ENST00000264039 PPIDQ08752 370 aaKnown RBP17.12■□□□□ 0.33
GPC1-201ENST00000264039 CHI3L2Q15782 390 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 CGB2Q6NT52 195 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 GDPD5Q8WTR4 605 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 CRAMP1Q96RY5 1269 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 BTBD7Q9P203 1132 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 ABCD1P33897 745 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 PTF1AQ7RTS3 328 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 PAFAH2Q99487 392 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 MIPEPQ99797 713 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 C1orf112Q9NSG2 853 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 ABLIM1O14639 778 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 HNRNPCL1O60812 293 aaKnown RBP17.12■□□□□ 0.33
GPC1-201ENST00000264039 MAP3K6O95382 1288 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 PTK7Q13308 1070 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 QRICH1Q2TAL8 776 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 ASPRV1Q53RT3 343 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 ZNF804AQ7Z570 1209 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 LENG1Q96BZ8 264 aaPredicted RBP17.12■□□□□ 0.33
GPC1-201ENST00000264039 OXNAD1Q96HP4 312 aaPredicted RBP17.12■□□□□ 0.33
GPC1-201ENST00000264039 MAK16Q9BXY0 300 aaKnown RBP17.12■□□□□ 0.33
GPC1-201ENST00000264039 FHDC1Q9C0D6 1143 aaPredicted RBP17.12■□□□□ 0.33
GPC1-201ENST00000264039 SENP1Q9P0U3 644 aa17.12■□□□□ 0.33
GPC1-201ENST00000264039 H0YIN7 160 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 IL6STP40189 918 aaPredicted RBP17.11■□□□□ 0.33
GPC1-201ENST00000264039 CCR3P51677 355 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 SMTNL2Q2TAL5 461 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 ZDHHC14Q8IZN3 488 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 NRG4Q8WWG1 115 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 POMGNT1Q8WZA1 660 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 PTPRN2Q92932 1015 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 MECRQ9BV79 373 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 STX18Q9P2W9 335 aaKnown RBP17.11■□□□□ 0.33
GPC1-201ENST00000264039 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
GPC1-201ENST00000264039 APOBEC2Q9Y235 224 aaKnown RBP17.11■□□□□ 0.33
GPC1-201ENST00000264039 IQANK1A0A1B0GTG1 560 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 TBC1D12O60347 775 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 TMEM119Q4V9L6 283 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 ARSHQ5FYA8 562 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 SEPT12Q8IYM1 358 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 TTC25Q96NG3 672 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 CAAP1Q9H8G2 361 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 PCSK1NQ9UHG2 260 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 COMMD3-BMI1R4GMX3 469 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 AIM2O14862 343 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 PEX3P56589 373 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 LMNB2Q03252 620 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 OR52E8Q6IFG1 317 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 NOP9Q86U38 636 aaKnown RBP17.11■□□□□ 0.33
GPC1-201ENST00000264039 ATP11CQ8NB49 1132 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 RBM15BQ8NDT2 890 aaKnown RBP17.11■□□□□ 0.33
GPC1-201ENST00000264039 PPP4R1Q8TF05 950 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 NAP1L4Q99733 375 aaKnown RBP17.11■□□□□ 0.33
GPC1-201ENST00000264039 ANKRD2Q9GZV1 360 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 AGPAT3Q9NRZ7 376 aa17.11■□□□□ 0.33
GPC1-201ENST00000264039 ARHGAP10A1A4S6 786 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 MIER3Q7Z3K6 550 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 OR6Y1Q8NGX8 325 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 NAT14Q8WUY8 206 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 ZFAND2BQ8WV99 257 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 CBWD1Q9BRT8 395 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 DCLK3Q9C098 648 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 JMJD4Q9H9V9 463 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 KCNMB3Q9NPA1 279 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 TSC22D4Q9Y3Q8 395 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 DTNAQ9Y4J8 743 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 PCDHB4Q9Y5E5 795 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 H7C0C1 242 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 C2CD2LO14523 706 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 ZBTB5O15062 677 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 ASMTLO95671 621 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 GAP43P17677 238 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 ANXA13P27216 316 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 ATP5OP48047 213 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 CACNB3P54284 484 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 GTF2IP78347 998 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 BMPR2Q13873 1038 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 LGSNQ5TDP6 509 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 WDR75Q8IWA0 830 aaKnown RBP17.1■□□□□ 0.33
GPC1-201ENST00000264039 ZSWIM2Q8NEG5 633 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 WWP1Q9H0M0 922 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 SLC16A4O15374 487 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 MAGEB3O15480 346 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 T-ENOLP0DO92 83 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 GEMIN4P57678 1058 aaKnown RBP17.1■□□□□ 0.33
GPC1-201ENST00000264039 TTC16Q8NEE8 873 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 NEDD1Q8NHV4 660 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 CATSPER2Q96P56 530 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 SAR1AQ9NR31 198 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 DNPEPQ9ULA0 475 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 FIS1Q9Y3D6 152 aa17.1■□□□□ 0.33
GPC1-201ENST00000264039 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.09■□□□□ 0.33
GPC1-201ENST00000264039 OCRLQ01968 901 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms