RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 PPP1R13BQ96KQ4 1090 aa8.78□□□□□ -1
GTF3C3-201ENST00000263956 SYT15Q9BQS2 421 aa8.78□□□□□ -1
GTF3C3-201ENST00000263956 CENPHQ9H3R5 247 aa8.78□□□□□ -1
GTF3C3-201ENST00000263956 DONSONQ9NYP3 566 aa8.78□□□□□ -1
GTF3C3-201ENST00000263956 CPSF3Q9UKF6 684 aaKnown RBP8.78□□□□□ -1
GTF3C3-201ENST00000263956 AP1G2O75843 785 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 MOCS3O95396 460 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 LRG1P02750 347 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 PPM1AP35813 382 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 SEPT7Q16181 437 aaKnown RBP8.77□□□□□ -1
GTF3C3-201ENST00000263956 TMEM63BQ5T3F8 832 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 TMCO3Q6UWJ1 677 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 OTOP2Q7RTS6 562 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 CCDC105Q8IYK2 499 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 LRRC43Q8N309 656 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 SLC35F6Q8N357 371 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 CYFIP2Q96F07 1278 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 ZNF512Q96ME7 567 aaPredicted RBP8.77□□□□□ -1
GTF3C3-201ENST00000263956 SLITRK1Q96PX8 696 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 RNF19AQ9NV58 838 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 WBP1LQ9NX94 342 aa8.77□□□□□ -1
GTF3C3-201ENST00000263956 TIMM13Q9Y5L4 95 aaPredicted RBP8.77□□□□□ -1
GTF3C3-201ENST00000263956 MYH4Q9Y623 1939 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 A0A1B0GUA9 196 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 LRRC10BA6NIK2 292 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 TLL1O43897 1013 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 B4GALT4O60513 344 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 EOMESO95936 686 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 KRT3P12035 628 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 IFFO1Q0D2I5 559 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 DCLRE1AQ6PJP8 1040 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 EPM2AIP1Q7L775 607 aaPredicted RBP8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 RFX6Q8HWS3 928 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 KCTD6Q8NC69 237 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 UBA3Q8TBC4 463 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 ZNF564Q8TBZ8 553 aaPredicted RBP8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 CPA5Q8WXQ8 436 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 NUP85Q9BW27 656 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 CALN1Q9BXU9 219 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 IP6K2Q9UHH9 426 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 PLAGL2Q9UPG8 496 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 LRRD1A4D1F6 860 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 DNAJB2P25686 324 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 GBP2P32456 591 aaPredicted RBP8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 RAP1GAPP47736 663 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 DLG4P78352 724 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 ZACNQ401N2 412 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 PSRC1Q6PGN9 363 aaPredicted RBP8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 SERINC5Q86VE9 423 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 TNS4Q8IZW8 715 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 RIN2Q8WYP3 895 aaPredicted RBP8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 RFFLQ8WZ73 363 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 CHP1Q99653 195 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 NFKBIZQ9BYH8 718 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 MTRF1LQ9UGC7 380 aaKnown RBP8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 SF3B1O75533 1304 aaKnown RBP eCLIP8.77□□□□□ -1.013e-7■■■■■ 225.4
GTF3C3-201ENST00000263956 LAMB1P07942 1786 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 SMIM28A0A1B0GU29 152 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 APOEP02649 317 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 NEFHP12036 1026 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 CKBP12277 381 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 FPGSQ05932 587 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 CBWD6Q4V339 395 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 EPC2Q52LR7 807 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 CBWD3Q5JTY5 395 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 CBWD5Q5RIA9 395 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 KAZNQ674X7 775 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 C8orf74Q6P047 294 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 LRRC31Q6UY01 552 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 MMS22LQ6ZRQ5 1243 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 RNF10Q8N5U6 811 aaKnown RBP8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 LRRC52Q8N7C0 313 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 STKLD1Q8NE28 680 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 SLC30A5Q8TAD4 765 aa8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 EIF2AQ9BY44 585 aaKnown RBP8.77□□□□□ -1.01
GTF3C3-201ENST00000263956 MIF4GDA9UHW6 222 aaKnown RBP8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 FTCDO95954 541 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 TUBBP07437 444 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 RFC2P35250 354 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 NDST1P52848 882 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 FAM193AP78312 1265 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 IRX5P78411 483 aaPredicted RBP8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 CDR2Q01850 454 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 MKRN4PQ13434 485 aaPredicted RBP8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 FAM187BQ17R55 369 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 FAM228AQ86W67 206 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 BBS5Q8N3I7 341 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 CCDC89Q8N998 374 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 TC2NQ8N9U0 490 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 ANKLE1Q8NAG6 615 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 OR5B17Q8NGF7 314 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 RSAD2Q8WXG1 361 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 PDLIM2Q96JY6 352 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 EMILIN2Q9BXX0 1053 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 IKZF4Q9H2S9 585 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 ASIC3Q9UHC3 531 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 JRKLQ9Y4A0 524 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 TTLL3Q9Y4R7 772 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 PCDHB5Q9Y5E4 795 aa8.76□□□□□ -1.01
GTF3C3-201ENST00000263956 ADGRG1Q9Y653 693 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms