RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PPP1R1BQ9UD71 204 aaPredicted RBP9.66□□□□□ -0.86
MSH4-201ENST00000263187 AGO2Q9UKV8 859 aaKnown RBP9.66□□□□□ -0.86
MSH4-201ENST00000263187 KAT6AQ92794 2004 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 C2orf71A6NGG8 1288 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 WNT10BO00744 389 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 EDN1P05305 212 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 SLC8A1P32418 973 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 GTF2H1P32780 548 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 TNFSF9P41273 254 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 MSH2P43246 934 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 SESN3P58005 492 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 ALCAMQ13740 583 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 SLC1A5Q15758 541 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 SPDYE2Q495Y8 402 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 LIN9Q5TKA1 542 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 SNRNP48Q6IEG0 339 aaKnown RBP9.66□□□□□ -0.86
MSH4-201ENST00000263187 MCF2L2Q86YR7 1114 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 C12orf50Q8NA57 414 aaPredicted RBP9.66□□□□□ -0.86
MSH4-201ENST00000263187 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.66□□□□□ -0.86
MSH4-201ENST00000263187 GRK7Q8WTQ7 553 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 IFT74Q96LB3 600 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 MFSD14AQ96MC6 490 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 IWS1Q96ST2 819 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 CCDC77Q9BR77 488 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 TRABDQ9H4I3 376 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 PCSK1NQ9UHG2 260 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 CDH16O75309 829 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 ARHGEF18Q6ZSZ5 1173 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 RFX8Q6ZV50 586 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 MON1BQ7L1V2 547 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 C12orf56Q8IXR9 622 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 CCDC89Q8N998 374 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 MORC4Q8TE76 937 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 PPP1R16BQ96T49 567 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 MSTO1Q9BUK6 570 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 TMEM109Q9BVC6 243 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 KIAA1586Q9HCI6 787 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 NPHS2Q9NP85 383 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 PHTF1Q9UMS5 762 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 C10orf71Q711Q0 1435 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 FAM47DPA6NHR8 397 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 FGFR1P11362 822 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 MUTP22033 750 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 MARK3P27448 753 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 OGDHQ02218 1023 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 BNIP1Q12981 228 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 CUL2Q13617 745 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 EMC1Q8N766 993 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 ASAP3Q8TDY4 903 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 SLC38A10Q9HBR0 1119 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 NKX1-2Q9UD57 310 aaPredicted RBP9.65□□□□□ -0.86
MSH4-201ENST00000263187 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.65□□□□□ -0.86
MSH4-201ENST00000263187 COQ4Q9Y3A0 265 aa9.65□□□□□ -0.86
MSH4-201ENST00000263187 CSDE1O75534 798 aaKnown RBP9.65□□□□□ -0.87
MSH4-201ENST00000263187 RGS20O76081 388 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 OAS1P00973 400 aaKnown RBP9.65□□□□□ -0.87
MSH4-201ENST00000263187 KRT4P19013 534 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 ATP5DP30049 168 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 GDF10P55107 478 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 NOMO3P69849 1222 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 IL9RQ01113 521 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 SP2Q02086 613 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 STRN3Q13033 797 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 KLF1Q13351 362 aaPredicted RBP9.65□□□□□ -0.87
MSH4-201ENST00000263187 R3HDM1Q15032 1099 aaKnown RBP9.65□□□□□ -0.87
MSH4-201ENST00000263187 ZNF568Q3ZCX4 644 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 ANKRD22Q5VYY1 191 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 PAXIP1Q6ZW49 1069 aaPredicted RBP9.65□□□□□ -0.87
MSH4-201ENST00000263187 SAMD7Q7Z3H4 446 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 CCDC33Q8N5R6 958 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 KCTD17Q8N5Z5 321 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 P3H4Q92791 437 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 CYP26B1Q9NR63 512 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 NXF1Q9UBU9 619 aaKnown RBP9.65□□□□□ -0.87
MSH4-201ENST00000263187 AGTPBP1Q9UPW5 1226 aa9.65□□□□□ -0.87
MSH4-201ENST00000263187 K7ERI5 159 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 NPM3O75607 178 aaKnown RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 NEBLO76041 1014 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 SRGAP2CP0DJJ0 459 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 NEFHP12036 1026 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 CD19P15391 556 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 GCAP28676 217 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 RAP1GAPP47736 663 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 HMGCS2P54868 508 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 ACTR2P61160 394 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 TFDP1Q14186 410 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 HHATQ5VTY9 493 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 C7orf43Q8WVR3 580 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 MAK16Q9BXY0 300 aaKnown RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 KIAA1683Q9H0B3 1180 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 CCDC134Q9H6E4 229 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 A1CFQ9NQ94 594 aaKnown RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 ZMYND8Q9ULU4 1186 aaPredicted RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 LRRC37AA6NMS7 1700 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 CD48P09326 243 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 GCLCP48506 637 aaPredicted RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 JAK3P52333 1124 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 KRT76Q01546 638 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 GCNT1Q02742 428 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 TAF5Q15542 800 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms