RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 SYF2O95926 243 aaKnown RBP10.35□□□□□ -0.75
TTC39A-201ENST00000262675 EPB41P11171 864 aaKnown RBP10.35□□□□□ -0.75
TTC39A-201ENST00000262675 GPC3P51654 580 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 C2orf54Q08AI8 447 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 PRR16Q569H4 304 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 ARSHQ5FYA8 562 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 C8orf74Q6P047 294 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 SYCE2Q6PIF2 218 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 ZNF410Q86VK4 478 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 ZDHHC14Q8IZN3 488 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 TMEM169Q96HH4 297 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 MKNK1Q9BUB5 465 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 TEKT3Q9BXF9 490 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 NLRC4Q9NPP4 1024 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 RNF19AQ9NV58 838 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 PPME1Q9Y570 386 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 IRAK3Q9Y616 596 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 GOLGA6BA6NDN3 693 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 DKC1O60832 514 aaKnown RBP eCLIP10.35□□□□□ -0.75
TTC39A-201ENST00000262675 GAS7O60861 476 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 TBCAO75347 108 aaKnown RBP10.35□□□□□ -0.75
TTC39A-201ENST00000262675 PRPF6O94906 941 aaKnown RBP10.35□□□□□ -0.75
TTC39A-201ENST00000262675 SPATA31C1P0DKV0 1188 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 CLCN3P51790 818 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 NAP1L1P55209 391 aaKnown RBP10.35□□□□□ -0.75
TTC39A-201ENST00000262675 TCF15Q12870 199 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 RAPGEF1Q13905 1077 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 MEI1Q5TIA1 1274 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 ELMSAN1Q6PJG2 1045 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 ZNF598Q86UK7 904 aaKnown RBP10.35□□□□□ -0.75
TTC39A-201ENST00000262675 GLIS3Q8NEA6 775 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 LENG9Q96B70 501 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 PBKQ96KB5 322 aa10.35□□□□□ -0.75
TTC39A-201ENST00000262675 CALR3Q96L12 384 aaKnown RBP10.35□□□□□ -0.75
TTC39A-201ENST00000262675 NIFKQ9BYG3 293 aaKnown RBP10.35□□□□□ -0.75
TTC39A-201ENST00000262675 A0A0A6YYK5 440 aaPredicted RBP10.34□□□□□ -0.75
TTC39A-201ENST00000262675 C2orf71A6NGG8 1288 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 PROB1E7EW31 1015 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 GALR2O43603 387 aaPredicted RBP10.34□□□□□ -0.75
TTC39A-201ENST00000262675 CCDC172P0C7W6 258 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 NPEPPSP55786 919 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 FOXK2Q01167 660 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 PRKCEQ02156 737 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 EXOC3L4Q17RC7 722 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 XKR3Q5GH77 459 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 ATAT1Q5SQI0 421 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 KIAA1841Q6NSI8 718 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 NELFCDQ8IXH7 590 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 TDRD5Q8NAT2 981 aaKnown RBP10.34□□□□□ -0.75
TTC39A-201ENST00000262675 NLRP7Q8WX94 980 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 ATOH1Q92858 354 aaPredicted RBP10.34□□□□□ -0.75
TTC39A-201ENST00000262675 PGBD4Q96DM1 585 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 SPAG5Q96R06 1193 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 FAM204AQ9H8W3 233 aa10.34□□□□□ -0.75
TTC39A-201ENST00000262675 TULP2O00295 520 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 N4BP1O75113 896 aaKnown RBP10.33□□□□□ -0.76
TTC39A-201ENST00000262675 CLASP2O75122 1294 aaKnown RBP10.33□□□□□ -0.76
TTC39A-201ENST00000262675 TNNC1P63316 161 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 IER5LQ5T953 404 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 LLGL2Q6P1M3 1020 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 POTEGQ6S5H5 508 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 GLB1LQ6UWU2 654 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 DDX53Q86TM3 631 aaKnown RBP10.33□□□□□ -0.76
TTC39A-201ENST00000262675 KREMEN2Q8NCW0 462 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 C1orf131Q8NDD1 294 aaKnown RBP10.33□□□□□ -0.76
TTC39A-201ENST00000262675 TAF4BQ92750 862 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 SLC5A5Q92911 643 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 REEP2Q9BRK0 252 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 LRRC1Q9BTT6 524 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 DPP7Q9UHL4 492 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 SSX2IPQ9Y2D8 614 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 HCFC2Q9Y5Z7 792 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 HIDE1A8MVS5 230 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 MSH4O15457 936 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 GFRA3O60609 400 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 CXCL14O95715 111 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 UCHL3P15374 230 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 FERP16591 822 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 BCAR1P56945 870 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 MYBPC2Q14324 1141 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 TARBP2Q15633 366 aaKnown RBP10.33□□□□□ -0.76
TTC39A-201ENST00000262675 CLLU1OSQ5K130 101 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 LRCH2Q5VUJ6 765 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 SYCE1Q8N0S2 351 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 MREGQ8N565 214 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 FAM76AQ8TAV0 307 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 HELQQ8TDG4 1101 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 WHAMMQ8TF30 809 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 ACSF2Q96CM8 615 aaPredicted RBP10.33□□□□□ -0.76
TTC39A-201ENST00000262675 PPP1R16BQ96T49 567 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 RUFY1Q96T51 708 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 SH3GL2Q99962 352 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.33□□□□□ -0.76
TTC39A-201ENST00000262675 ZBP1Q9H171 429 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 GDF3Q9NR23 364 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 TBC1D7Q9P0N9 293 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 KANSL3Q9P2N6 904 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 VAV3Q9UKW4 847 aa10.33□□□□□ -0.76
TTC39A-201ENST00000262675 HSF2BPO75031 334 aa10.32□□□□□ -0.76
TTC39A-201ENST00000262675 ZNF623O75123 536 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms