RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 SOX4Q06945 474 aaPredicted RBP13.88□□□□□ -0.19
VAMP7-201ENST00000262640 INCA1Q0VD86 236 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 ACAD10Q6JQN1 1059 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 SLC39A5Q6ZMH5 540 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 DNAAF5Q86Y56 855 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 ECHDC2Q86YB7 292 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 MMS19Q96T76 1030 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 FTHL17Q9BXU8 183 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 RSAD1Q9HA92 442 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 PUF60Q9UHX1 559 aaKnown RBP13.88□□□□□ -0.19
VAMP7-201ENST00000262640 BARX2Q9UMQ3 279 aaPredicted RBP13.88□□□□□ -0.19
VAMP7-201ENST00000262640 CAPN6Q9Y6Q1 641 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 BUB1O43683 1085 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 CILPO75339 1184 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 THP07101 528 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 CDH8P55286 799 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 SV2CQ496J9 727 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 GSTCDQ8NEC7 633 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 ZNF606Q8WXB4 792 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 RFFLQ8WZ73 363 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 DCDC2CA8MYV0 355 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 URI1O94763 535 aaPredicted RBP13.87□□□□□ -0.19
VAMP7-201ENST00000262640 CYP1A1P04798 512 aaPredicted RBP13.87□□□□□ -0.19
VAMP7-201ENST00000262640 UNGP13051 313 aaPredicted RBP13.87□□□□□ -0.19
VAMP7-201ENST00000262640 ABCB4P21439 1286 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 CTCFP49711 727 aaPredicted RBP13.87□□□□□ -0.19
VAMP7-201ENST00000262640 TAF6P49848 677 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 LBX1P52954 281 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 ZNF394Q53GI3 561 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 C1orf53Q5VUE5 145 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 ANKLE1Q8NAG6 615 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 RNF169Q8NCN4 708 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 TOX2Q96NM4 488 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 GDAP2Q9NXN4 497 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 SNX9Q9Y5X1 595 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 ATN1P54259 1190 aaPredicted RBP13.87□□□□□ -0.19
VAMP7-201ENST00000262640 RAD23BP54727 409 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 GPC5P78333 572 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 TUBB2AQ13885 445 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 SLC24A5Q71RS6 500 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 ZNF598Q86UK7 904 aaKnown RBP13.87□□□□□ -0.19
VAMP7-201ENST00000262640 WHAMMQ8TF30 809 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 CALR3Q96L12 384 aaKnown RBP13.87□□□□□ -0.19
VAMP7-201ENST00000262640 TUBB2BQ9BVA1 445 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 THAP2Q9H0W7 228 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 L2HGDHQ9H9P8 463 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 GOLGA2P5Q9HBQ8 144 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 JRKLQ9Y4A0 524 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 PCDHGC5Q9Y5F6 944 aa13.87□□□□□ -0.19
VAMP7-201ENST00000262640 TRIP11Q15643 1979 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 KPNA7A9QM74 516 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 C9IYK1 514 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 MED7O43513 233 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 LSM8O95777 96 aaKnown RBP13.86□□□□□ -0.19
VAMP7-201ENST00000262640 EOMESO95936 686 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 COL6A1P12109 1028 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 BRD2P25440 801 aaKnown RBP13.86□□□□□ -0.19
VAMP7-201ENST00000262640 NOP2P46087 812 aaKnown RBP13.86□□□□□ -0.19
VAMP7-201ENST00000262640 SCNN1GP51170 649 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 CENPCQ03188 943 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 TCEAL1Q15170 157 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 RHOT2Q8IXI1 618 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 TRIM11Q96F44 468 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 TMEM176AQ96HP8 235 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 TSPYL2Q9H2G4 693 aaPredicted RBP13.86□□□□□ -0.19
VAMP7-201ENST00000262640 PCDHGC3Q9UN70 934 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 RIOK3O14730 519 aaKnown RBP13.86□□□□□ -0.19
VAMP7-201ENST00000262640 INPPL1O15357 1258 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 NBNO60934 754 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 NSFP46459 744 aaKnown RBP13.86□□□□□ -0.19
VAMP7-201ENST00000262640 GJA8P48165 433 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 NOMO3P69849 1222 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 FAM189BP81408 668 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 RTN4RL1Q86UN2 441 aaPredicted RBP13.86□□□□□ -0.19
VAMP7-201ENST00000262640 SLC4A11Q8NBS3 891 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 ARHGEF26Q96DR7 871 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 CYFIP2Q96F07 1278 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 ELOVL4Q9GZR5 314 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 MIOSQ9NXC5 875 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 GTF3C4Q9UKN8 822 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 KIAA1257Q9ULG3 409 aa13.86□□□□□ -0.19
VAMP7-201ENST00000262640 PARNO95453 639 aaKnown RBP13.85□□□□□ -0.19
VAMP7-201ENST00000262640 MYBL1P10243 752 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 CD19P15391 556 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 RPL9P32969 192 aaKnown RBP13.85□□□□□ -0.19
VAMP7-201ENST00000262640 NDST1P52848 882 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 GRIK3Q13003 919 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 PLEKHG4Q58EX7 1191 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 NAA35Q5VZE5 725 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 SLC35G2Q8TBE7 412 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 LINC01599Q8WXQ3 324 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 TFAP2BQ92481 460 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 SEPT8Q92599 483 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 APBB2Q92870 758 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 NT5C1AQ9BXI3 368 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 HMGXB4Q9UGU5 601 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 SPTLC1O15269 473 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 PALMO75781 387 aa13.85□□□□□ -0.19
VAMP7-201ENST00000262640 CAPN2P17655 700 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms