RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 C17orf80Q9BSJ5 609 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 KATNAL1Q9BW62 490 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 JMJD4Q9H9V9 463 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 PSMC3IPQ9P2W1 217 aaPredicted RBP12.67□□□□□ -0.38
COL8A1-201ENST00000261037 MYO3AQ8NEV4 1616 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 ANTXR2P58335 489 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 CCZ1BP86790 482 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 CCZ1P86791 482 aaPredicted RBP12.67□□□□□ -0.38
COL8A1-201ENST00000261037 IFNEQ86WN2 208 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 SEPT8Q92599 483 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 MXRA8Q9BRK3 442 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 SH3BP1Q9Y3L3 701 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 PITPNM2Q9BZ72 1349 aa12.67□□□□□ -0.38
COL8A1-201ENST00000261037 SRP72O76094 671 aaKnown RBP12.66□□□□□ -0.38
COL8A1-201ENST00000261037 GPD1P21695 349 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 PIGHQ14442 188 aaPredicted RBP12.66□□□□□ -0.38
COL8A1-201ENST00000261037 ZRANB3Q5FWF4 1079 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 SYDE1Q6ZW31 735 aaPredicted RBP12.66□□□□□ -0.38
COL8A1-201ENST00000261037 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 CCSER1Q9C0I3 900 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 KDM6AO15550 1401 aaPredicted RBP12.66□□□□□ -0.38
COL8A1-201ENST00000261037 PTPRUQ92729 1446 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 RHOBTB3O94955 611 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 CAMTA2O94983 1202 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 VCAM1P19320 739 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 BYSLQ13895 437 aaKnown RBP12.66□□□□□ -0.38
COL8A1-201ENST00000261037 ARHGEF7Q14155 803 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 SV2CQ496J9 727 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 IER5Q5VY09 327 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 FAM71DQ8N9W8 422 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 FAM162AQ96A26 154 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 AIM2O14862 343 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 MAN1A2O60476 641 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 SOAT1P35610 550 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 ITGA8P53708 1063 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 TMEM106CQ9BVX2 250 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 SHCBP1LQ9BZQ2 653 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 UVRAGQ9P2Y5 699 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 CHUKO15111 745 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 AGTP01019 485 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 ARL4DP49703 201 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 GMPSP49915 693 aaPredicted RBP12.66□□□□□ -0.38
COL8A1-201ENST00000261037 INPP5AQ14642 412 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 SNX17Q15036 470 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 DDX42Q86XP3 938 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL8A1-201ENST00000261037 RIN2Q8WYP3 895 aaPredicted RBP12.66□□□□□ -0.38
COL8A1-201ENST00000261037 FOPNLQ96NB1 174 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 SRPK1Q96SB4 655 aaKnown RBP12.66□□□□□ -0.38
COL8A1-201ENST00000261037 PARK7Q99497 189 aaKnown RBP12.66□□□□□ -0.38
COL8A1-201ENST00000261037 NT5C1AQ9BXI3 368 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 CAPN10Q9HC96 672 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 CDYLQ9Y232 598 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 SLC30A1Q9Y6M5 507 aa12.66□□□□□ -0.38
COL8A1-201ENST00000261037 POLR1AO95602 1720 aaPredicted RBP12.66□□□□□ -0.38
COL8A1-201ENST00000261037 ITGB3P05106 788 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 HDAC4P56524 1084 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 GLRA4Q5JXX5 417 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 C10orf120Q5SQS8 335 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 SAMD7Q7Z3H4 446 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 ZNF555Q8NEP9 628 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 CRAMP1Q96RY5 1269 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 DOLKQ9UPQ8 538 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 FRMPD1Q5SYB0 1578 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 CNTNAP5Q8WYK1 1306 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 ZNF263O14978 683 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 EXTL3O43909 919 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 NCAM1P13591 858 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 NR1I3Q14994 352 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 NBPF9Q3BBW0 867 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 E4F1Q66K89 784 aaPredicted RBP12.65□□□□□ -0.38
COL8A1-201ENST00000261037 LAYNQ6UX15 382 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 SPATA18Q8TC71 538 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 PLA2G12BQ9BX93 195 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 KLC4Q9NSK0 619 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 DIP2AQ14689 1571 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 KIAA0391O15091 583 aaKnown RBP12.65□□□□□ -0.38
COL8A1-201ENST00000261037 PSMD3O43242 534 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 CYP2C9P11712 490 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 NPEPPSP55786 919 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 TKFCQ3LXA3 575 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 PTRHD1Q6GMV3 140 aaKnown RBP12.65□□□□□ -0.38
COL8A1-201ENST00000261037 LPAR1Q92633 364 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 OTUB1Q96FW1 271 aaPredicted RBP12.65□□□□□ -0.38
COL8A1-201ENST00000261037 VCPKMTQ9H867 229 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 MYOZ2Q9NPC6 264 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 NYAP2Q9P242 653 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 ARL2BPQ9Y2Y0 163 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 PCDHB7Q9Y5E2 793 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 JCADQ9P266 1359 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 IL18RAPO95256 599 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 TCF7P36402 384 aaPredicted RBP12.65□□□□□ -0.38
COL8A1-201ENST00000261037 KCNJ1P48048 391 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 PMS1P54277 932 aaKnown RBP12.65□□□□□ -0.38
COL8A1-201ENST00000261037 NAB2Q15742 525 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 RABGAP1LQ5R372 815 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 GALNT4Q8N4A0 578 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 GRAMD1AQ96CP6 724 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 TSPAN17Q96FV3 270 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 EPN3Q9H201 632 aa12.65□□□□□ -0.38
COL8A1-201ENST00000261037 ZFYVE28Q9HCC9 887 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms