RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 AGAP11Q8TF27 550 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 ZBED2Q9BTP6 218 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 THAP2Q9H0W7 228 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 PARVAQ9NVD7 372 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 BTBD7Q9P203 1132 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 RAB21Q9UL25 225 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 MYO3BQ8WXR4 1341 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 MYO1GB0I1T2 1018 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 E7ENQ6 273 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 SLC16A3O15427 465 aaKnown RBP10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 BLVRAP53004 296 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 PDAP1Q13442 181 aaKnown RBP10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 PARD3BQ8TEW8 1205 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 SNX19Q92543 992 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 CATSPER2Q96P56 530 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 CYLDQ9NQC7 956 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 NDUFA13Q9P0J0 144 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 M0QYV0 167 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 KRT7P08729 469 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 GNL1P36915 607 aaPredicted RBP10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 LRRC8BQ6P9F7 803 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 BBS2Q9BXC9 721 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 DDX56Q9NY93 547 aaKnown RBP10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 ARHGAP20Q9P2F6 1191 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 TROAPQ12815 778 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 CEP78Q5JTW2 689 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 MFSD4BQ5TF39 518 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 TTI2Q6NXR4 508 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 KDELC2Q7Z4H8 507 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 CNKSR1Q969H4 720 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 RAB6BQ9NRW1 208 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 DAPK2Q9UIK4 370 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 NAGPAQ9UK23 515 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 ZC3H13Q5T200 1668 aaKnown RBP10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 AP3B1O00203 1094 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 KCNA2P16389 499 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 ABCD1P33897 745 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 SERPINB5P36952 375 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 GPSM2P81274 684 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 MROH9Q5TGP6 573 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 OLFML1Q6UWY5 402 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 LPCAT2Q7L5N7 544 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 NLGN1Q8N2Q7 840 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 DIS3LQ8TF46 1054 aaKnown RBP10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 MTMR4Q9NYA4 1195 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 RBAKQ9NYW8 714 aaPredicted RBP10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 SFMBT1Q9UHJ3 866 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 O00370 1275 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 PTPN4P29074 926 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 LBRQ14739 615 aaKnown RBP10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 BBS5Q8N3I7 341 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 TSEN2Q8NCE0 465 aaKnown RBP10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 MCPH1Q8NEM0 835 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 ATG4AQ8WYN0 398 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 ASPSCR1Q9BZE9 553 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 SEMA6BQ9H3T3 888 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 SPATA31A3Q5VYP0 1347 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 SLC37A4O43826 429 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 SERPINB8P50452 374 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 SURF1Q15526 300 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 TTMPQ5BVD1 217 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 FAM102AQ5T9C2 384 aaPredicted RBP10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 GPD1LQ8N335 351 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 CAVIN3Q969G5 261 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 TMEM120AQ9BXJ8 343 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 DHX35Q9H5Z1 703 aaKnown RBP10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 SNX13Q9Y5W8 968 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 BAZ2BQ9UIF8 2168 aaKnown RBP10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 PPRC1Q5VV67 1664 aaKnown RBP10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 LGR5O75473 907 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 KRT16P08779 473 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 PPIDQ08752 370 aaKnown RBP10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 ZNF512BQ96KM6 892 aaPredicted RBP10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 KIAA1586Q9HCI6 787 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 OVOS2A0A0J9YW53 1432 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 OVOS2Q6IE36 1432 aa10.2□□□□□ -0.78
CTDSPL2-201ENST00000260327 NBNO60934 754 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 TMEM253P0C7T8 217 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 MAPK10P53779 464 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 KCTD2Q14681 263 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 NANOGNBQ7Z5D8 188 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 RIN3Q8TB24 985 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 PGBD4Q96DM1 585 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 AGAP3Q96P47 875 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 NR1H4Q96RI1 486 aaPredicted RBP10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 POLR3FQ9H1D9 316 aaPredicted RBP10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 BLOC1S6Q9UL45 172 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 CDYLQ9Y232 598 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 CIITAP33076 1130 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 MAPK7Q13164 816 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 NDUFAF2Q8N183 169 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 RMI1Q9H9A7 625 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 AP4S1Q9Y587 144 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 TBXAS1P24557 533 aaPredicted RBP10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 GSTT1P30711 240 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 ACOT2P49753 483 aa10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 GEMIN4P57678 1058 aaKnown RBP10.19□□□□□ -0.78
CTDSPL2-201ENST00000260327 ZNF543Q08ER8 600 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms