RNA–Protein interactions for RNA: ENST00000256495.3

BHLHE40-201, Transcript of basic helix-loop-helix family member e40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BHLHE40, Length 3,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE40-201ENST00000256495 MLXIPLQ9NP71 852 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 TBK1Q9UHD2 729 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 RSPH14Q9UHP6 348 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 CNTNAP2Q9UHC6 1331 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 FOXO6A8MYZ6 492 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 KRT1P04264 644 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 PSMA2P25787 234 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 NFIL3Q16649 462 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 SGSM1Q2NKQ1 1148 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 RUFY4Q6ZNE9 571 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 FAM149B1Q96BN6 582 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 JPH2Q9BR39 696 aaPredicted RBP13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 RARAP10276 462 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 NRLP54845 237 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 BPIFB4P59827 614 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 GCNT1Q02742 428 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 WDR93Q6P2C0 686 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 ABRAQ8N0Z2 381 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 LPPQ93052 612 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 GPATCH2LQ9NWQ4 482 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 TUBGCP4Q9UGJ1 667 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 KCNG1Q9UIX4 513 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 GTF3C4Q9UKN8 822 aa13.34□□□□□ -0.27
BHLHE40-201ENST00000256495 I3L4J1 428 aa13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 MMP3P08254 477 aa13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 ZSCAN5DPP0CG00 497 aa13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 ZNF792Q3KQV3 632 aa13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 PPP6R3Q5H9R7 873 aaPredicted RBP13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 FAM102AQ5T9C2 384 aaPredicted RBP13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 ZNF662Q6ZS27 426 aa13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 PLPPR4Q7Z2D5 763 aa13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 NDRG1Q92597 394 aaKnown RBP13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 HES6Q96HZ4 224 aa13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 C16orf70Q9BSU1 422 aa13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 ISCUQ9H1K1 167 aa13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 R3HDM2Q9Y2K5 976 aaKnown RBP13.33□□□□□ -0.27
BHLHE40-201ENST00000256495 KIAA0100Q14667 2235 aaKnown RBP13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 KIAA1217Q5T5P2 1943 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 IGKV6D-21A0A0A0MT36 114 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 DCAF8L1A6NGE4 600 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 DDX3YO15523 660 aaKnown RBP13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 SMIM10L2AP0DMW4 78 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 SMIM10L2BP0DMW5 78 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 PDCLQ13371 301 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 TAF5Q15542 800 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 SLC10A6Q3KNW5 377 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 TEX2Q8IWB9 1127 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 MGARPQ8TDB4 240 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 AFAP1L1Q8TED9 768 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 PRMT7Q9NVM4 692 aaPredicted RBP13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 MEIS3P2A8K0S8 358 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 TULP2O00295 520 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 ATP2C2O75185 946 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 HOXC6P09630 235 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 RFX1P22670 979 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 GCLCP48506 637 aaPredicted RBP13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 NNTQ13423 1086 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 UBAP2Q5T6F2 1119 aaKnown RBP13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 LEKR1Q6ZMV7 388 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 JAMLQ86YT9 394 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 TMEM35BQ8NCS4 154 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 FAM76AQ8TAV0 307 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 DDX1Q92499 740 aaKnown RBP13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 DPP3Q9NY33 737 aa13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 CPSF3Q9UKF6 684 aaKnown RBP13.33□□□□□ -0.28
BHLHE40-201ENST00000256495 ASS1P00966 412 aaKnown RBP13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 ETS1P14921 441 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 PRLRP16471 622 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 IGFBP6P24592 240 aaPredicted RBP13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 RFC1P35251 1148 aaPredicted RBP13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 NDST1P52848 882 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 CALCOCO2Q13137 446 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 CRHR2Q13324 411 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 SH3PXD2AQ5TCZ1 1133 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 ZPBP2Q6X784 338 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 ZNF365Q70YC5 407 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 FMNL3Q8IVF7 1028 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 SCUBE3Q8IX30 993 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 ZDHHC14Q8IZN3 488 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 TMEM40Q8WWA1 233 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 SELENOSQ9BQE4 189 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 HERPUD2Q9BSE4 406 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 B3GNT5Q9BYG0 378 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 METTL5Q9NRN9 209 aaKnown RBP13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 SLC5A4Q9NY91 659 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 RANBP2P49792 3224 aaKnown RBP13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 COL11A1P12107 1806 aaPredicted RBP13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 MYADML2A6NDP7 307 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 A8MXQ7 604 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 STRNO43815 780 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 LCP1P13796 627 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 RTP1P59025 263 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 DUSP28Q4G0W2 176 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 RAB6CQ53S08 254 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 TTC27Q6P3X3 843 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 ZC3H18Q86VM9 953 aaKnown RBP13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 WDR49Q8IV35 697 aa13.32□□□□□ -0.28
BHLHE40-201ENST00000256495 PRELID2Q8N945 189 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms