RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 LRRC19Q9H756 370 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 FGFR4P22455 802 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 MDH1P40925 334 aaKnown RBP19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 CLCN3P51790 818 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 ZNF132P52740 706 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 PPP1R7Q15435 360 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 LIN9Q5TKA1 542 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 ANKS1BQ7Z6G8 1248 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 ZNF467Q7Z7K2 595 aaPredicted RBP19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 EFCAB13Q8IY85 973 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 UBR7Q8N806 425 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 ZNF606Q8WXB4 792 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 MAML3Q96JK9 1138 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 IMPG2Q9BZV3 1241 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 KLHL11Q9NVR0 708 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 IGKV6-21A0A0C4DH24 114 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 TMEM88BA6NKF7 163 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 FAM155AB1AL88 458 aaPredicted RBP19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 TRIM66O15016 1216 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 OGTO15294 1046 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 SNAI1O95863 264 aaPredicted RBP19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 BRD2P25440 801 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 SLC1A1P43005 524 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 SEC24CP53992 1094 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 MAGOHP61326 146 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 TFAMQ00059 246 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 KRT17Q04695 432 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 TRIP13Q15645 432 aaPredicted RBP19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 CCDC50Q8IVM0 306 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 ZBTB8OSQ8IWT0 167 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 PABPC3Q9H361 631 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 CPSF3Q9UKF6 684 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 CAND2O75155 1236 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 WEE2P0C1S8 567 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 TCF4P15884 667 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 TMOD1P28289 359 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 SSR1P43307 286 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 RPL7AP62424 266 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 MCL1Q07820 350 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 SLC29A2Q14542 456 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 MXD4Q14582 209 aaPredicted RBP19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 ODF2Q5BJF6 829 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 EEF1DP3Q658K8 133 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 TRIM72Q6ZMU5 477 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 PHF13Q86YI8 300 aaPredicted RBP19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 TMEM192Q8IY95 271 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 NPLOC4Q8TAT6 608 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 PPP1R16BQ96T49 567 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 MINDY3Q9H8M7 445 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 VTA1Q9NP79 307 aa19.87■□□□□ 0.77
PDLIM4-201ENST00000253754 SMIM23A6NLE4 172 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 INO80B-WBP1J3KQ70 363 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 MYO1CO00159 1063 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 TP73O15350 636 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 TLR3O15455 904 aaKnown RBP19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 CSDE1O75534 798 aaKnown RBP19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 RALAP11233 206 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 ADCYAP1R1P41586 468 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 INHBEP58166 350 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 PLEKHA7Q6IQ23 1121 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 MAMDC4Q6UXC1 1216 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 TCP11Q8WWU5 503 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 ART4Q93070 314 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 PLVAPQ9BX97 442 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 INO80BQ9C086 356 aaPredicted RBP19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 CISHQ9NSE2 258 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 SLC15A5A6NIM6 579 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 TULP2O00295 520 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 NDUFAB1O14561 156 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 HOXC6P09630 235 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 IQCF3P0C7M6 154 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 IGBP1P78318 339 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 DENND2CQ68D51 928 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 PLPPR4Q7Z2D5 763 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 CCDC25Q86WR0 208 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 TINF2Q9BSI4 451 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 SLC12A6Q9UHW9 1150 aa19.86■□□□□ 0.77
PDLIM4-201ENST00000253754 PTGISQ16647 500 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 DUOXA2Q1HG44 320 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 ZNF568Q3ZCX4 644 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 AGBL2Q5U5Z8 902 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 KATNBL1Q9H079 304 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 RNPEPQ9H4A4 650 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 NUDT17P0C025 328 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 C1QBPQ07021 282 aaKnown RBP19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 ARHGAP1Q07960 439 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 TMEM132AQ24JP5 1023 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 ATP13A4Q4VNC1 1196 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 ATF7IP2Q5U623 682 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 EFCAB12Q6NXP0 572 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 C17orf99Q6UX52 265 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 DCLK3Q9C098 648 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 NIF3L1Q9GZT8 377 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 MRPL47Q9HD33 250 aaKnown RBP19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 PTPRHQ9HD43 1115 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 TMEM51Q9NW97 253 aa19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 MTRF1LQ9UGC7 380 aaKnown RBP19.85■□□□□ 0.77
PDLIM4-201ENST00000253754 ASIC3Q9UHC3 531 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms