RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 HS2ST1Q7LGA3 356 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 RDH13Q8NBN7 331 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 OR5B17Q8NGF7 314 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 KIAA1586Q9HCI6 787 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 INTS13Q9NVM9 706 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 DNMT3BQ9UBC3 853 aaKnown RBP24.78■■□□□ 1.56
LSM4-201ENST00000252816 SIX4Q9UIU6 781 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 AGAP1Q9UPQ3 857 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 DOCK8Q8NF50 2099 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 OR6C75A6NL08 312 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 FSHRP23945 695 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 DPYDQ12882 1025 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 SNRNP35Q16560 246 aaKnown RBP24.77■■□□□ 1.56
LSM4-201ENST00000252816 C12orf56Q8IXR9 622 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 CSGALNACT2Q8N6G5 542 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 XXYLT1Q8NBI6 393 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 ZNF560Q96MR9 790 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 TMEM209Q96SK2 561 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 OXCT2Q9BYC2 517 aaPredicted RBP24.77■■□□□ 1.56
LSM4-201ENST00000252816 EPS15L1Q9UBC2 864 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 SORCS3Q9UPU3 1222 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 INSL5Q9Y5Q6 135 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 TSC2P49815 1807 aa24.77■■□□□ 1.56
LSM4-201ENST00000252816 KPNA7A9QM74 516 aa24.76■■□□□ 1.55
LSM4-201ENST00000252816 COL9A1P20849 921 aa24.76■■□□□ 1.55
LSM4-201ENST00000252816 SV2CQ496J9 727 aa24.76■■□□□ 1.55
LSM4-201ENST00000252816 WSCD1Q658N2 575 aa24.76■■□□□ 1.55
LSM4-201ENST00000252816 OR10T2Q8NGX3 314 aa24.76■■□□□ 1.55
LSM4-201ENST00000252816 PGLYRP2Q96PD5 576 aa24.76■■□□□ 1.55
LSM4-201ENST00000252816 RTP3Q9BQQ7 232 aa24.76■■□□□ 1.55
LSM4-201ENST00000252816 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.76■■□□□ 1.55
LSM4-201ENST00000252816 CGNQ9P2M7 1197 aaKnown RBP24.76■■□□□ 1.55
LSM4-201ENST00000252816 RAPGEFL1Q9UHV5 662 aa24.76■■□□□ 1.55
LSM4-201ENST00000252816 ITGA11Q9UKX5 1188 aa24.76■■□□□ 1.55
LSM4-201ENST00000252816 NOTCH4Q99466 2003 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 TMEM221A6NGB7 291 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 M0R296 226 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 LRG1P02750 347 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 TMEM191BP0C7N4 346 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 PNPLA4P41247 253 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 CYP24A1Q07973 514 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 SIGLEC14Q08ET2 396 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 GPR17Q13304 367 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 MTMR3Q13615 1198 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 MYBPC2Q14324 1141 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 SURF1Q15526 300 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 HFE2Q6ZVN8 426 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 ITFG1Q8TB96 612 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 CRISPLD1Q9H336 500 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 KCTD10Q9H3F6 313 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 KCNK12Q9HB15 430 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 DSEQ9UL01 958 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 MAFFQ9ULX9 164 aa24.75■■□□□ 1.55
LSM4-201ENST00000252816 RHOBTB3O94955 611 aa24.74■■□□□ 1.55
LSM4-201ENST00000252816 KRT19P08727 400 aa24.74■■□□□ 1.55
LSM4-201ENST00000252816 LAMP2P13473 410 aa24.74■■□□□ 1.55
LSM4-201ENST00000252816 RBP5P82980 135 aa24.74■■□□□ 1.55
LSM4-201ENST00000252816 PABPC1LQ4VXU2 614 aaKnown RBP24.74■■□□□ 1.55
LSM4-201ENST00000252816 FMR1NBQ8N0W7 255 aaPredicted RBP24.74■■□□□ 1.55
LSM4-201ENST00000252816 LRRC52Q8N7C0 313 aa24.74■■□□□ 1.55
LSM4-201ENST00000252816 ANKRD36BP1Q96IX9 119 aa24.74■■□□□ 1.55
LSM4-201ENST00000252816 GZF1Q9H116 711 aaPredicted RBP24.74■■□□□ 1.55
LSM4-201ENST00000252816 RHOP08100 348 aa24.73■■□□□ 1.55
LSM4-201ENST00000252816 BFSP1Q12934 665 aa24.73■■□□□ 1.55
LSM4-201ENST00000252816 PSMD6Q15008 389 aa24.73■■□□□ 1.55
LSM4-201ENST00000252816 DUOXA2Q1HG44 320 aa24.73■■□□□ 1.55
LSM4-201ENST00000252816 METTL23Q86XA0 190 aa24.73■■□□□ 1.55
LSM4-201ENST00000252816 WDR49Q8IV35 697 aa24.73■■□□□ 1.55
LSM4-201ENST00000252816 UBALD2Q8IYN6 164 aa24.73■■□□□ 1.55
LSM4-201ENST00000252816 GOLGA5Q8TBA6 731 aa24.73■■□□□ 1.55
LSM4-201ENST00000252816 RSAD2Q8WXG1 361 aa24.73■■□□□ 1.55
LSM4-201ENST00000252816 CCDC127Q96BQ5 260 aa24.73■■□□□ 1.55
LSM4-201ENST00000252816 ASIC4Q96FT7 647 aa24.73■■□□□ 1.55
LSM4-201ENST00000252816 DMAC2Q9NW81 257 aa24.73■■□□□ 1.55
LSM4-201ENST00000252816 MTMR11A4FU01 709 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 EXOC3O60645 756 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 TNNC2P02585 160 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 DLATP10515 647 aaKnown RBP24.72■■□□□ 1.55
LSM4-201ENST00000252816 TWF1Q12792 350 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 DUSP4Q13115 394 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 SNW1Q13573 536 aaKnown RBP24.72■■□□□ 1.55
LSM4-201ENST00000252816 SLC5A9Q2M3M2 681 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 PDCL2Q8N4E4 241 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 ATAD1Q8NBU5 361 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 ENGASEQ8NFI3 743 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 ST13P5Q8NFI4 369 aaPredicted RBP24.72■■□□□ 1.55
LSM4-201ENST00000252816 FGF13Q92913 245 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 MFSD14AQ96MC6 490 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 ZCWPW1Q9H0M4 648 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 CEP72Q9P209 647 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 IGSF9Q9P2J2 1179 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 CDH7Q9ULB5 785 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 L1RE1Q9UN81 338 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 YIPF1Q9Y548 306 aa24.72■■□□□ 1.55
LSM4-201ENST00000252816 GOLGA6L4A6NEF3 574 aa24.71■■□□□ 1.55
LSM4-201ENST00000252816 PTPN2P17706 415 aa24.71■■□□□ 1.55
LSM4-201ENST00000252816 CDR1P51861 262 aa24.71■■□□□ 1.55
LSM4-201ENST00000252816 TDGQ13569 410 aa24.71■■□□□ 1.55
LSM4-201ENST00000252816 CENPPQ6IPU0 288 aa24.71■■□□□ 1.55
LSM4-201ENST00000252816 TTC9BQ8N6N2 239 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms