RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ASB14A6NK59 587 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 DKC1O60832 514 aaKnown RBP eCLIP18.03■□□□□ 0.48
FOXA1-201ENST00000250448 DLATP10515 647 aaKnown RBP18.03■□□□□ 0.48
FOXA1-201ENST00000250448 ATP5DP30049 168 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 RWDD2BP57060 319 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 KRT17Q04695 432 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 EMC2Q15006 297 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 NPLOC4Q8TAT6 608 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 TRAPPC12Q8WVT3 735 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 ZNF653Q96CK0 615 aa18.03■□□□□ 0.48
FOXA1-201ENST00000250448 DGAT1O75907 488 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 CYP1A2P05177 515 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 RPSAP08865 295 aaKnown RBP18.02■□□□□ 0.48
FOXA1-201ENST00000250448 ALADP13716 330 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 CREB1P16220 341 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 MYO1EQ12965 1108 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 DMP1Q13316 513 aaPredicted RBP18.02■□□□□ 0.48
FOXA1-201ENST00000250448 CRYMQ14894 314 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 TAPT1Q6NXT6 567 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 PLEKHH3Q7Z736 793 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 GBP7Q8N8V2 638 aaPredicted RBP18.02■□□□□ 0.48
FOXA1-201ENST00000250448 SLCO2A1Q92959 643 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 KMT5AQ9NQR1 393 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 PDLIM7Q9NR12 457 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.02■□□□□ 0.48
FOXA1-201ENST00000250448 DENND3A2RUS2 1198 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 SNAI1O95863 264 aaPredicted RBP18.02■□□□□ 0.48
FOXA1-201ENST00000250448 C1orf220Q5T0J3 134 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 TMEM161BQ8NDZ6 487 aa18.02■□□□□ 0.48
FOXA1-201ENST00000250448 RSRC1Q96IZ7 334 aaKnown RBP18.02■□□□□ 0.48
FOXA1-201ENST00000250448 TP73O15350 636 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 CLDN3O15551 220 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 TTLL4Q14679 1199 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 PRAMEF19Q5SWL8 479 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 NUGGCQ68CJ6 796 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 RHBDF2Q6PJF5 856 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 FAM71AQ8IYT1 594 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 ANKRD42Q8N9B4 389 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 AGAP11Q8TF27 550 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 ZNF668Q96K58 619 aaPredicted RBP18.01■□□□□ 0.47
FOXA1-201ENST00000250448 GPBP1L1Q9HC44 474 aaPredicted RBP18.01■□□□□ 0.47
FOXA1-201ENST00000250448 ASIC3Q9UHC3 531 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 GTF3C4Q9UKN8 822 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 GOLGA8IPA6NC78 632 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 GOLGA8JA6NMD2 632 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 CHKAP35790 457 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 SPATA21Q7Z572 469 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 CKAP2Q8WWK9 683 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 PSPC1Q8WXF1 523 aaKnown RBP18.01■□□□□ 0.47
FOXA1-201ENST00000250448 C15orf41Q9Y2V0 281 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 O00370 1275 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 STRNO43815 780 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 GJB6O95452 261 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 MXI1P50539 228 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 NCKAP1LP55160 1127 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 COPS2P61201 443 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 FMO1Q01740 532 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 BNIP1Q12981 228 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 MKRN4PQ13434 485 aaPredicted RBP18.01■□□□□ 0.47
FOXA1-201ENST00000250448 GRB14Q14449 540 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 SGO2Q562F6 1265 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 ASAP3Q8TDY4 903 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 NSMCE1Q8WV22 266 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 C1orf54Q8WWF1 131 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 MAML3Q96JK9 1138 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 ACCSQ96QU6 501 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 MLXIPLQ9NP71 852 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 KCNK9Q9NPC2 374 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 UVRAGQ9P2Y5 699 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 CTNNAL1Q9UBT7 734 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 ARL2BPQ9Y2Y0 163 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 L3MBTL1Q9Y468 752 aa18.01■□□□□ 0.47
FOXA1-201ENST00000250448 BRCA2P51587 3418 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 CYP26A1O43174 497 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 GTF2BQ00403 316 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 FAM160B1Q5W0V3 765 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 SLC47A2Q86VL8 602 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 PPP1R13LQ8WUF5 828 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 KREMEN1Q96MU8 473 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 TMEM206Q9H813 350 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 ACP6Q9NPH0 428 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 FSCN2O14926 492 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 LLGL1Q15334 1064 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 LRRC71Q8N4P6 559 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 MCPH1Q8NEM0 835 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 PLEKHO2Q8TD55 490 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 KIFAP3Q92845 792 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 KLHL29Q96CT2 875 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 SNF8Q96H20 258 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18■□□□□ 0.47
FOXA1-201ENST00000250448 TBX20Q9UMR3 447 aa18■□□□□ 0.47
FOXA1-201ENST00000250448 ITIH2P19823 946 aa17.99■□□□□ 0.47
FOXA1-201ENST00000250448 SLC8A3P57103 927 aa17.99■□□□□ 0.47
FOXA1-201ENST00000250448 SNX1Q13596 522 aa17.99■□□□□ 0.47
FOXA1-201ENST00000250448 MAMDC4Q6UXC1 1216 aa17.99■□□□□ 0.47
FOXA1-201ENST00000250448 IFNL1Q8IU54 200 aa17.99■□□□□ 0.47
FOXA1-201ENST00000250448 C12orf56Q8IXR9 622 aa17.99■□□□□ 0.47
FOXA1-201ENST00000250448 GDAP1Q8TB36 358 aa17.99■□□□□ 0.47
FOXA1-201ENST00000250448 SAAL1Q96ER3 474 aa17.99■□□□□ 0.47
FOXA1-201ENST00000250448 MANSC4A6NHS7 340 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms