RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 MAMDC4Q6UXC1 1216 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 ANKS1BQ7Z6G8 1248 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 BCAS4Q8TDM0 211 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 RNF25Q96BH1 459 aaPredicted RBP23.02■■□□□ 1.28
CLN6-201ENST00000249806 RUNDC3BQ96NL0 473 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 PABPC3Q9H361 631 aaKnown RBP23.02■■□□□ 1.28
CLN6-201ENST00000249806 R3HDM2Q9Y2K5 976 aaKnown RBP23.02■■□□□ 1.28
CLN6-201ENST00000249806 PASKQ96RG2 1323 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 A0A087WZ62 844 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 DCDC2CA8MYV0 355 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 ASAP2O43150 1006 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 TNNC2P02585 160 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 IFFO1Q0D2I5 559 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 ZNF792Q3KQV3 632 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 KRT71Q3SY84 523 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 RHOT1Q8IXI2 618 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 WDTC1Q8N5D0 677 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 ANKRD36BP1Q96IX9 119 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 FAM118BQ9BPY3 351 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 FDXACB1Q9BRP7 624 aaPredicted RBP23.02■■□□□ 1.28
CLN6-201ENST00000249806 SEMA4AQ9H3S1 761 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 TNFSF13BQ9Y275 285 aa23.02■■□□□ 1.28
CLN6-201ENST00000249806 ZNF286BP0CG31 522 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 TCF4P15884 667 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 KRT17Q04695 432 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 ATP13A4Q4VNC1 1196 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 AFG1LQ8WV93 481 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 ART4Q93070 314 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 RPF1Q9H9Y2 349 aaKnown RBP23.01■■□□□ 1.27
CLN6-201ENST00000249806 NOVA2Q9UNW9 492 aaKnown RBP23.01■■□□□ 1.27
CLN6-201ENST00000249806 PLXNA1Q9UIW2 1896 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 PDHXO00330 501 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 RAP1GAPP47736 663 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 LAMC2Q13753 1193 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 SPDYCQ5MJ68 293 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 KLHL11Q9NVR0 708 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 PARP2Q9UGN5 583 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 PNMA3Q9UL41 463 aa23.01■■□□□ 1.27
CLN6-201ENST00000249806 MEFVO15553 781 aaPredicted RBP23■■□□□ 1.27
CLN6-201ENST00000249806 PSTPIP1O43586 416 aa23■■□□□ 1.27
CLN6-201ENST00000249806 VTNP04004 478 aa23■■□□□ 1.27
CLN6-201ENST00000249806 NFICP08651 508 aa23■■□□□ 1.27
CLN6-201ENST00000249806 ADCYAP1R1P41586 468 aa23■■□□□ 1.27
CLN6-201ENST00000249806 SLC29A2Q14542 456 aa23■■□□□ 1.27
CLN6-201ENST00000249806 TRIP13Q15645 432 aaPredicted RBP23■■□□□ 1.27
CLN6-201ENST00000249806 CPB2Q96IY4 423 aa23■■□□□ 1.27
CLN6-201ENST00000249806 DCLK3Q9C098 648 aa23■■□□□ 1.27
CLN6-201ENST00000249806 MTRF1LQ9UGC7 380 aaKnown RBP23■■□□□ 1.27
CLN6-201ENST00000249806 SIX4Q9UIU6 781 aa23■■□□□ 1.27
CLN6-201ENST00000249806 LOC102724159A0A0B4J2E5 919 aa23■■□□□ 1.27
CLN6-201ENST00000249806 TMEM191CA6NGB0 347 aa23■■□□□ 1.27
CLN6-201ENST00000249806 TP73O15350 636 aa23■■□□□ 1.27
CLN6-201ENST00000249806 GBP1P32455 592 aa23■■□□□ 1.27
CLN6-201ENST00000249806 CDH8P55286 799 aa23■■□□□ 1.27
CLN6-201ENST00000249806 KLF1Q13351 362 aaPredicted RBP23■■□□□ 1.27
CLN6-201ENST00000249806 PWP2Q15269 919 aaKnown RBP23■■□□□ 1.27
CLN6-201ENST00000249806 ZNF484Q5JVG2 852 aa23■■□□□ 1.27
CLN6-201ENST00000249806 SLCO2A1Q92959 643 aa23■■□□□ 1.27
CLN6-201ENST00000249806 MCEEQ96PE7 176 aa23■■□□□ 1.27
CLN6-201ENST00000249806 AKT3Q9Y243 479 aa23■■□□□ 1.27
CLN6-201ENST00000249806 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.99■■□□□ 1.27
CLN6-201ENST00000249806 LACTBL1A8MY62 500 aa22.99■■□□□ 1.27
CLN6-201ENST00000249806 TMOD1P28289 359 aa22.99■■□□□ 1.27
CLN6-201ENST00000249806 ZNF252P-AS1Q0IIN9 211 aa22.99■■□□□ 1.27
CLN6-201ENST00000249806 WDR72Q3MJ13 1102 aa22.99■■□□□ 1.27
CLN6-201ENST00000249806 ODF2Q5BJF6 829 aa22.99■■□□□ 1.27
CLN6-201ENST00000249806 KATNAL2Q8IYT4 538 aa22.99■■□□□ 1.27
CLN6-201ENST00000249806 TMEM35BQ8NCS4 154 aa22.99■■□□□ 1.27
CLN6-201ENST00000249806 IP6K2Q9UHH9 426 aa22.99■■□□□ 1.27
CLN6-201ENST00000249806 TCRBV5S1A1TA0A578 114 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 F8VP50 259 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 GH1P01241 217 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 STAG3L1P0CL83 205 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 FGFR4P22455 802 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 LSP1P33241 339 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 MDH1P40925 334 aaKnown RBP22.98■■□□□ 1.27
CLN6-201ENST00000249806 PHKA2P46019 1235 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 OGDHQ02218 1023 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 AMHR2Q16671 573 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 CYP4A22Q5TCH4 519 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 PPP1R2P3Q6NXS1 205 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 C1orf127Q8N9H9 656 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 UHMK1Q8TAS1 419 aaKnown RBP22.98■■□□□ 1.27
CLN6-201ENST00000249806 MAIP1Q8WWC4 291 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 NFKBIZQ9BYH8 718 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 OSBPL8Q9BZF1 889 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 PRMT7Q9NVM4 692 aaPredicted RBP22.98■■□□□ 1.27
CLN6-201ENST00000249806 LCMT1Q9UIC8 334 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 A6NNZ2 444 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 CAND2O75155 1236 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 LSM8O95777 96 aaKnown RBP22.98■■□□□ 1.27
CLN6-201ENST00000249806 NUDT17P0C025 328 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 CCT5P48643 541 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 CCNA1P78396 465 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 ORC1Q13415 861 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 TUBB8Q3ZCM7 444 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 AGBL2Q5U5Z8 902 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 DENND2CQ68D51 928 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 MS4A4AQ96JQ5 239 aa22.98■■□□□ 1.27
CLN6-201ENST00000249806 ASIC3Q9UHC3 531 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms