RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 BARX2Q9UMQ3 279 aaPredicted RBP19.28■□□□□ 0.68
PTPN12-201ENST00000248594 XPO1O14980 1071 aaKnown RBP19.28■□□□□ 0.68
PTPN12-201ENST00000248594 COBLL1Q53SF7 1204 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 TCHHL1Q5QJ38 904 aaPredicted RBP19.28■□□□□ 0.68
PTPN12-201ENST00000248594 TREML1Q86YW5 311 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 LRRC47Q8N1G4 583 aaKnown RBP19.28■□□□□ 0.68
PTPN12-201ENST00000248594 GALNT4Q8N4A0 578 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 CFAP57Q96MR6 1250 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 HERPUD2Q9BSE4 406 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 LRRC4BQ9NT99 713 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 WHRNQ9P202 907 aa19.28■□□□□ 0.68
PTPN12-201ENST00000248594 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.28■□□□□ 0.68
PTPN12-201ENST00000248594 ARFGEF2Q9Y6D5 1785 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 BAZ2AQ9UIF9 1905 aaKnown RBP19.27■□□□□ 0.68
PTPN12-201ENST00000248594 C15orf38-AP3S2A0A0A6YYH1 394 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 SPECC1L-ADORA2AF8WAN1 911 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 PEX1O43933 1283 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 CDK4P11802 303 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 ZNF200P98182 395 aaPredicted RBP19.27■□□□□ 0.68
PTPN12-201ENST00000248594 GRIK5Q16478 980 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 ARPINQ7Z6K5 226 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 MYCT1Q8N699 235 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 DGCR14Q96DF8 476 aaKnown RBP19.27■□□□□ 0.68
PTPN12-201ENST00000248594 ANAPC7Q9UJX3 599 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 ZMYM2Q9UBW7 1377 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 PABPC4LP0CB38 370 aaKnown RBP19.27■□□□□ 0.68
PTPN12-201ENST00000248594 TAL1P17542 331 aaPredicted RBP19.27■□□□□ 0.68
PTPN12-201ENST00000248594 SLC16A2P36021 539 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 RGS2P41220 211 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 ARID3BQ8IVW6 561 aaPredicted RBP19.27■□□□□ 0.68
PTPN12-201ENST00000248594 PPM1KQ8N3J5 372 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 MTMR9Q96QG7 549 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 TUBGCP4Q9UGJ1 667 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 NEU2Q9Y3R4 380 aa19.27■□□□□ 0.68
PTPN12-201ENST00000248594 USP17L5A8MUK1 530 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 CAPN15O75808 1086 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 ATF7P17544 494 aaPredicted RBP19.26■□□□□ 0.67
PTPN12-201ENST00000248594 PEX6Q13608 980 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 KLHL35Q6PF15 583 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 C7orf43Q8WVR3 580 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 BHMT2Q9H2M3 363 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 HEY1Q9Y5J3 304 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 AKAP11Q9UKA4 1901 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 LOC100653049A0A140TA62 436 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 KRT34O76011 436 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 ZNF24P17028 368 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 PMLP29590 882 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 SSTR1P30872 391 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 USP17L6PQ6QN14 398 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 RNF169Q8NCN4 708 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 SPEF2Q9C093 1822 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 H0YIN7 160 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 MED24O75448 989 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 SGPL1O95470 568 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 RALAP11233 206 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 CD58P19256 250 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 SERPINB8P50452 374 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 JAM2P57087 298 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 MYL7Q01449 175 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 PICALMQ13492 652 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 PTCD3Q96EY7 689 aaKnown RBP19.26■□□□□ 0.67
PTPN12-201ENST00000248594 OXNAD1Q96HP4 312 aaPredicted RBP19.26■□□□□ 0.67
PTPN12-201ENST00000248594 DCUN1D5Q9BTE7 237 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 ARMC7Q9H6L4 198 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 C10orf88Q9H8K7 445 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 PCDHGB4Q9UN71 923 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 TSC22D4Q9Y3Q8 395 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 PCDHGB5Q9Y5G0 923 aa19.26■□□□□ 0.67
PTPN12-201ENST00000248594 NCANO14594 1321 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 TRAFD1O14545 582 aaPredicted RBP19.25■□□□□ 0.67
PTPN12-201ENST00000248594 TP73O15350 636 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 KCNQ2O43526 872 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 CHMP2AO43633 222 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 SEPT12Q8IYM1 358 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 ICA1LQ8NDH6 482 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 PDLIM1O00151 329 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 BCRP11274 1271 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 FMO5P49326 533 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 CDK16Q00536 496 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 UBAP2LQ14157 1087 aaKnown RBP19.25■□□□□ 0.67
PTPN12-201ENST00000248594 TMEM259Q4ZIN3 620 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 CC2D2BQ6DHV5 1058 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 GLIS1Q8NBF1 620 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 PLVAPQ9BX97 442 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 USP17L15C9J2P7 530 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 USP17L13C9JLJ4 530 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 USP17L11C9JVI0 530 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 USP17L18D6R9N7 530 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 USP17L22D6RA61 530 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 USP17L17D6RBQ6 530 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 USP17L19D6RCP7 530 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 USP17L20D6RJB6 530 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 CRKLP46109 303 aaKnown RBP19.25■□□□□ 0.67
PTPN12-201ENST00000248594 GCLMP48507 274 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 USP17L24Q0WX57 530 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 GPS1Q13098 491 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 GK3PQ14409 553 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 PPP1R2P3Q6NXS1 205 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 ACAD11Q709F0 780 aa19.25■□□□□ 0.67
PTPN12-201ENST00000248594 MECRQ9BV79 373 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms