RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 TEX13BQ9BXU2 312 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 ST6GALNAC4Q9H4F1 302 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 APOBEC3GQ9HC16 384 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 A1CFQ9NQ94 594 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 PNMA3Q9UL41 463 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 GINS2Q9Y248 185 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 COQ4Q9Y3A0 265 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 L3MBTL1Q9Y468 752 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 PTPRJQ12913 1337 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 MYPNQ86TC9 1320 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 ASAP2O43150 1006 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 MTA2O94776 668 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 ZBTB7AO95365 584 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 CLNS1AP54105 237 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 PTK6Q13882 451 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 SLFN12LQ6IEE8 588 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 TMEM35BQ8NCS4 154 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 HSPH1Q92598 858 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 NOD2Q9HC29 1040 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 AAASQ9NRG9 546 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 IP6K2Q9UHH9 426 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 GGA2Q9UJY4 613 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 TRIM33Q9UPN9 1127 aa13.34□□□□□ -0.27
RAB3IP-201ENST00000247833 C5orf60A6NFR6 353 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 EIF4E1BA6NMX2 242 aaKnown RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 UNGP13051 313 aaPredicted RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 TNFSF9P41273 254 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 GMPSP49915 693 aaPredicted RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 MYL6P60660 151 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 KCNJ2P63252 427 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 CAV1Q03135 178 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 CYP1B1Q16678 543 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 PALM2Q8IXS6 379 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 SAMD3Q8N6K7 520 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 GLIS1Q8NBF1 620 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 RNF149Q8NC42 400 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 RBM41Q96IZ5 413 aaKnown RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 TRABDQ9H4I3 376 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 C17orf75Q9HAS0 396 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 ATXN2Q99700 1313 aaKnown RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 CSDE1O75534 798 aaKnown RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 NOMO3P69849 1222 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 FASTKD3Q14CZ7 662 aaKnown RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 PPP1R21Q6ZMI0 780 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 RFX6Q8HWS3 928 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 P3H4Q92791 437 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 MYCBPQ99417 103 aaPredicted RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 LBHD1Q9BQE6 289 aaPredicted RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 ETNK1Q9HBU6 452 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 NRBP2Q9NSY0 501 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 LY75O60449 1722 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 RASSF9O75901 435 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 OATP04181 439 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 SUPT20HL2P0C7V6 817 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 PECAM1P16284 738 aaPredicted RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 LMNB2Q03252 620 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 CCNG2Q16589 344 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 CDO1Q16878 200 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 ZNF699Q32M78 642 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 SUPT20HL1Q3ZLR7 823 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 FKBP1CQ5VVH2 108 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 TRIM50Q86XT4 487 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 EMC1Q8N766 993 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 ZNF526Q8TF50 670 aaPredicted RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 PRCCQ92733 491 aaPredicted RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 AVENQ9NQS1 362 aaPredicted RBP13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 ARL2BPQ9Y2Y0 163 aa13.33□□□□□ -0.28
RAB3IP-201ENST00000247833 LOC102724159A0A0B4J2E5 919 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 LDHAP00338 332 aaKnown RBP13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 KCNA2P16389 499 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 GLRA2P23416 452 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 TBXAS1P24557 533 aaPredicted RBP13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 RXRBP28702 533 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 SLC8A1P32418 973 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 CENPCQ03188 943 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 ZBTB16Q05516 673 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 NEDD9Q14511 834 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 ITIH4Q14624 930 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 STAT4Q14765 748 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 PSMD6Q15008 389 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 PWP2Q15269 919 aaKnown RBP13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 SCYL2Q6P3W7 929 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 ZNF677Q86XU0 584 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 RHPN2Q8IUC4 686 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 TEX2Q8IWB9 1127 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 PYROXD1Q8WU10 500 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 GINM1Q9NU53 330 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 DCTN4Q9UJW0 460 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 GRIN3BO60391 1043 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 ELF3P78545 371 aaPredicted RBP13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 TMEM132BQ14DG7 1078 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 ANGEL2Q5VTE6 544 aaKnown RBP13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 TRIM72Q6ZMU5 477 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 TAS1R3Q7RTX0 852 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 CTAGE3PQ8IX95 158 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 KCNV2Q8TDN2 545 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 SPOCK2Q92563 424 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 FAM47DPA6NHR8 397 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 MAP3K6O95382 1288 aa13.32□□□□□ -0.28
RAB3IP-201ENST00000247833 CST3P01034 146 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms