RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 PLS3P13797 630 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 VAV1P15498 845 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 KRT4P19013 534 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 ARFIP2P53365 341 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 AP3B2Q13367 1082 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 USH1GQ495M9 461 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 PHLDB2Q86SQ0 1253 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 LRRC6Q86X45 466 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 ST13P4Q8IZP2 240 aaPredicted RBP13.16□□□□□ -0.3
NR1D1-201ENST00000246672 NMD3Q96D46 503 aaKnown RBP13.16□□□□□ -0.3
NR1D1-201ENST00000246672 TTC25Q96NG3 672 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 OLFM3Q96PB7 478 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 EBF3Q9H4W6 596 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 ARMCX1Q9P291 453 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 ZNF510Q9Y2H8 683 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 OPHN1O60890 802 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 SLITRK3O94933 977 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 OR6B1O95007 311 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 MAN1A1P33908 653 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 C1QTNF12Q5T7M4 302 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 TDRPQ86YL5 185 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 ZNF276Q8N554 614 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 FBXO27Q8NI29 283 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 SKA1Q96BD8 255 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
NR1D1-201ENST00000246672 PLVAPQ9BX97 442 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 TRIM55Q9BYV6 548 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 KCNK13Q9HB14 408 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 DDX4Q9NQI0 724 aaKnown RBP13.16□□□□□ -0.3
NR1D1-201ENST00000246672 GTF3C4Q9UKN8 822 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 SPATA31A5Q5VU36 1347 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 SPATA31A6Q5VVP1 1343 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 SPATA31A7Q8IWB4 1347 aa13.16□□□□□ -0.3
NR1D1-201ENST00000246672 ITGA2BP08514 1039 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 HARSP12081 509 aaKnown RBP13.15□□□□□ -0.3
NR1D1-201ENST00000246672 CRABP2P29373 138 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 HOXA13P31271 388 aaPredicted RBP13.15□□□□□ -0.3
NR1D1-201ENST00000246672 RASA3Q14644 834 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 DDB1Q16531 1140 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 EPC2Q52LR7 807 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 CCDC62Q6P9F0 684 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 TPTE2Q6XPS3 522 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 ZSWIM2Q8NEG5 633 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 PPP2R3CQ969Q6 453 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 CLPTM1LQ96KA5 538 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 HSD17B14Q9BPX1 270 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 TMEM120AQ9BXJ8 343 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 MIS12Q9H081 205 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 VPS37BQ9H9H4 285 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 CLIC5Q9NZA1 410 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 SENP1Q9P0U3 644 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 XIRP1Q702N8 1843 aaKnown RBP13.15□□□□□ -0.3
NR1D1-201ENST00000246672 SHMT1P34896 483 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 ZNF76P36508 570 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 VAMP7P51809 220 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 SATL1Q86VE3 508 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 FAM71AQ8IYT1 594 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 PPM1KQ8N3J5 372 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 ZCCHC9Q8N567 271 aaKnown RBP13.15□□□□□ -0.3
NR1D1-201ENST00000246672 CCDC89Q8N998 374 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 ELMO3Q96BJ8 720 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 MPP4Q96JB8 637 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 KREMEN1Q96MU8 473 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 NDE1Q9NXR1 346 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 IL1RAPL1Q9NZN1 696 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 UVRAGQ9P2Y5 699 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 SERPINB13Q9UIV8 391 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 ANAPC7Q9UJX3 599 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 CHMP2BQ9UQN3 213 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 DAGLAQ9Y4D2 1042 aa13.15□□□□□ -0.3
NR1D1-201ENST00000246672 B2RBV5 119 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 DNAJC6O75061 913 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 PIAS1O75925 651 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 CALCAP01258 141 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 MAGEA10P43363 369 aaPredicted RBP13.15□□□□□ -0.31
NR1D1-201ENST00000246672 RAP1GDS1P52306 607 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 CDK16Q00536 496 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 TMEM62Q0P6H9 643 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 CETN1Q12798 172 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 P3H1Q32P28 736 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 RIPOR1Q6ZS17 1223 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 MYLK4Q86YV6 388 aaPredicted RBP13.15□□□□□ -0.31
NR1D1-201ENST00000246672 SMC1BQ8NDV3 1235 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 DNAJC1Q96KC8 554 aaKnown RBP13.15□□□□□ -0.31
NR1D1-201ENST00000246672 PANX3Q96QZ0 392 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 OSBPL8Q9BZF1 889 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 MANSC1Q9H8J5 431 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 PPM1HQ9ULR3 514 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 STK24Q9Y6E0 443 aa13.15□□□□□ -0.31
NR1D1-201ENST00000246672 F8W8V4 182 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 GOLGA8RI6L899 631 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 MAPK4P31152 587 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 SREBF1P36956 1147 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 GPSM2P81274 684 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 MAP7Q14244 749 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 KRT72Q14CN4 511 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 DBN1Q16643 649 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 LRRC36Q1X8D7 754 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms