RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 BMP1P13497 986 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 P4HA1P13674 534 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 ARF4P18085 180 aaPredicted RBP14.14□□□□□ -0.15
SLIRP-201ENST00000238688 EIF4BP23588 611 aaKnown RBP14.14□□□□□ -0.15
SLIRP-201ENST00000238688 GRM5P41594 1212 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 PDE6CP51160 858 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 MRPS5P82675 430 aaKnown RBP14.14□□□□□ -0.15
SLIRP-201ENST00000238688 GFPT1Q06210 699 aaPredicted RBP14.14□□□□□ -0.15
SLIRP-201ENST00000238688 NCOA4Q13772 614 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 WHAMMP3Q1A5X7 153 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 TDRD10Q5VZ19 366 aaKnown RBP14.14□□□□□ -0.15
SLIRP-201ENST00000238688 SLC27A1Q6PCB7 646 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 TRIM72Q6ZMU5 477 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 H2AFVQ71UI9 128 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 ZSWIM2Q8NEG5 633 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 WDR24Q96S15 920 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.14□□□□□ -0.15
SLIRP-201ENST00000238688 CCDC94Q9BW85 323 aaPredicted RBP14.14□□□□□ -0.15
SLIRP-201ENST00000238688 PDZD7Q9H5P4 517 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 MINDY3Q9H8M7 445 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 LMCD1Q9NZU5 365 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 RNF14Q9UBS8 474 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 PCDHB2Q9Y5E7 798 aa14.14□□□□□ -0.15
SLIRP-201ENST00000238688 FOXN3O00409 490 aaPredicted RBP14.13□□□□□ -0.15
SLIRP-201ENST00000238688 VTNP04004 478 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 TMEM253P0C7T8 217 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 TNFAIP3P21580 790 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 CD52P31358 61 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 HADHBP55084 474 aaKnown RBP14.13□□□□□ -0.15
SLIRP-201ENST00000238688 NOP14P78316 857 aaKnown RBP14.13□□□□□ -0.15
SLIRP-201ENST00000238688 CYP27A1Q02318 531 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 ARID5AQ03989 594 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 TMEM62Q0P6H9 643 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 ENOX2Q16206 610 aaKnown RBP14.13□□□□□ -0.15
SLIRP-201ENST00000238688 PAPD7Q5XG87 772 aaKnown RBP14.13□□□□□ -0.15
SLIRP-201ENST00000238688 RHOT2Q8IXI1 618 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 SYCE1Q8N0S2 351 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 CEP112Q8N8E3 955 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 EPS8L1Q8TE68 723 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 ZNF516Q92618 1163 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 SEMA4DQ92854 862 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 TRIM11Q96F44 468 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 AGPAT1Q99943 283 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 LACRTQ9GZZ8 138 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 CDHR5Q9HBB8 845 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 TOPORSQ9NS56 1045 aaPredicted RBP14.13□□□□□ -0.15
SLIRP-201ENST00000238688 CDC23Q9UJX2 597 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 ITGA11Q9UKX5 1188 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 PCDHGC5Q9Y5F6 944 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 TRPV2Q9Y5S1 764 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 MRFAP1Q9Y605 127 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 SQORQ9Y6N5 450 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 NCANO14594 1321 aa14.13□□□□□ -0.15
SLIRP-201ENST00000238688 ANKRD62A6NC57 917 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 RIOK3O14730 519 aaKnown RBP14.12□□□□□ -0.15
SLIRP-201ENST00000238688 XPOTO43592 962 aaKnown RBP14.12□□□□□ -0.15
SLIRP-201ENST00000238688 STAG3L1P0CL83 205 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 KCNQ1P51787 676 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 APBA1Q02410 837 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 TRPC3Q13507 836 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 CUL2Q13617 745 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 ARHGAP44Q17R89 818 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 CATSPER4Q7RTX7 472 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 TRAPPC11Q7Z392 1133 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 ARHGEF19Q8IW93 802 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 MNS1Q8NEH6 495 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 ZNF689Q96CS4 500 aaPredicted RBP14.12□□□□□ -0.15
SLIRP-201ENST00000238688 KREMEN1Q96MU8 473 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 ACAP3Q96P50 834 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 POP1Q99575 1024 aaKnown RBP14.12□□□□□ -0.15
SLIRP-201ENST00000238688 CELF4Q9BZC1 486 aaKnown RBP14.12□□□□□ -0.15
SLIRP-201ENST00000238688 NIF3L1Q9GZT8 377 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 LCMT1Q9UIC8 334 aa14.12□□□□□ -0.15
SLIRP-201ENST00000238688 EFCAB8A8MWE9 144 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 DDX3XO00571 662 aaKnown RBP eCLIP14.11□□□□□ -0.153e-31■■■■■ 27.5
SLIRP-201ENST00000238688 CES2O00748 559 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 RTN2O75298 545 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 URI1O94763 535 aaPredicted RBP14.11□□□□□ -0.15
SLIRP-201ENST00000238688 VNN1O95497 513 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 TUBBP07437 444 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 TCP1P17987 556 aaKnown RBP14.11□□□□□ -0.15
SLIRP-201ENST00000238688 YARSP54577 528 aaKnown RBP14.11□□□□□ -0.15
SLIRP-201ENST00000238688 CDR2Q01850 454 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 CKAP4Q07065 602 aaKnown RBP14.11□□□□□ -0.15
SLIRP-201ENST00000238688 GJB7Q6PEY0 223 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 ZBTB33Q86T24 672 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 HACE1Q8IYU2 909 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 SLC35F6Q8N357 371 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 FBXO22Q8NEZ5 403 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 ADAMTS19Q8TE59 1207 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 TMEM40Q8WWA1 233 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 CTNNBL1Q8WYA6 563 aaPredicted RBP14.11□□□□□ -0.15
SLIRP-201ENST00000238688 RFFLQ8WZ73 363 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 YME1L1Q96TA2 773 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 DNAI2Q9GZS0 605 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 ISCUQ9H1K1 167 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 CYP3A43Q9HB55 503 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 CHST12Q9NRB3 414 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 AJAP1Q9UKB5 411 aaPredicted RBP14.11□□□□□ -0.15
SLIRP-201ENST00000238688 PADI3Q9ULW8 664 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms