RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 RMDN2Q96LZ7 410 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 RXFP1Q9HBX9 757 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 ARHGAP28Q9P2N2 729 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 PNMA3Q9UL41 463 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 PTPRJQ12913 1337 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 IGF2BP3O00425 579 aaKnown RBP eCLIP16.46■□□□□ 0.23
CTSD-201ENST00000236671 EXTL3O43909 919 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 C4BPAP04003 597 aaKnown RBP16.46■□□□□ 0.23
CTSD-201ENST00000236671 ABHD2P08910 425 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 ALDH5A1P51649 535 aaPredicted RBP16.46■□□□□ 0.23
CTSD-201ENST00000236671 RTP1P59025 263 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 C1QTNF8P60827 252 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 PSMD6Q15008 389 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 WDR44Q5JSH3 913 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 LIN9Q5TKA1 542 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 ARHGEF16Q5VV41 709 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 TLDC1Q6P9B6 456 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 PASD1Q8IV76 773 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 ZCCHC9Q8N567 271 aaKnown RBP16.46■□□□□ 0.23
CTSD-201ENST00000236671 EXD1Q8NHP7 514 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 TBC1D31Q96DN5 1066 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 ZIC5Q96T25 663 aa16.46■□□□□ 0.23
CTSD-201ENST00000236671 WDR81Q562E7 1941 aa16.46■□□□□ 0.22
CTSD-201ENST00000236671 TMEM88BA6NKF7 163 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 VNN1O95497 513 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 CD58P19256 250 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 MGAT5Q09328 741 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 STRN3Q13033 797 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 MTFR1Q15390 333 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 P3H1Q32P28 736 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 PLEKHA7Q6IQ23 1121 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 PPP1R21Q6ZMI0 780 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 TRIM72Q6ZMU5 477 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 NLRX1Q86UT6 975 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 MCPH1Q8NEM0 835 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 MAML1Q92585 1016 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 N4BP2L2Q92802 583 aaPredicted RBP16.45■□□□□ 0.22
CTSD-201ENST00000236671 KIAA1683Q9H0B3 1180 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 NKIRAS1Q9NYS0 192 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 ADAM22Q9P0K1 906 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 SNCAIPQ9Y6H5 919 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 DGAT1O75907 488 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 TAC1P20366 129 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 FOXN2P32314 431 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 PIK3CAP42336 1068 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 MAGEA4P43358 317 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 APLP1P51693 650 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 NLRP11P59045 1033 aaKnown RBP16.45■□□□□ 0.22
CTSD-201ENST00000236671 ADCY1Q08828 1119 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 CUL2Q13617 745 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 RNF43Q68DV7 783 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 MIS18BP1Q6P0N0 1132 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 PAXIP1Q6ZW49 1069 aaPredicted RBP16.45■□□□□ 0.22
CTSD-201ENST00000236671 PHF13Q86YI8 300 aaPredicted RBP16.45■□□□□ 0.22
CTSD-201ENST00000236671 ABRAQ8N0Z2 381 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 RIBC1Q8N443 379 aaPredicted RBP16.45■□□□□ 0.22
CTSD-201ENST00000236671 C2orf69Q8N8R5 385 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 ANKLE1Q8NAG6 615 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 ATP6V0A1Q93050 837 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 RBM15Q96T37 977 aaKnown RBP eCLIP16.45■□□□□ 0.221e-8■□□□□ 10.8
CTSD-201ENST00000236671 CCDC77Q9BR77 488 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 EBF2Q9HAK2 575 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 APOBEC3GQ9HC16 384 aaKnown RBP16.45■□□□□ 0.22
CTSD-201ENST00000236671 MRPL47Q9HD33 250 aaKnown RBP16.45■□□□□ 0.22
CTSD-201ENST00000236671 ARHGEF3Q9NR81 526 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 USTQ9Y2C2 406 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 TELO2Q9Y4R8 837 aa16.45■□□□□ 0.22
CTSD-201ENST00000236671 NFASCO94856 1347 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 GCAP28676 217 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 GJA5P36382 358 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 GJC1P36383 396 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 TMED2Q15363 201 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 ACCSLQ4AC99 568 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 CYP4F22Q6NT55 531 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 ASRGL1Q7L266 308 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 CCHCR1Q8TD31 782 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 KLHL29Q96CT2 875 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 STAMBPL1Q96FJ0 436 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 VCPIP1Q96JH7 1222 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 FOXP3Q9BZS1 431 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 POLR3FQ9H1D9 316 aaPredicted RBP16.44■□□□□ 0.22
CTSD-201ENST00000236671 KIAA1586Q9HCI6 787 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 PTPRFP10586 1907 aa16.44■□□□□ 0.22
CTSD-201ENST00000236671 FAM47DPA6NHR8 397 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 RASA4BC9J798 803 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 TLR3O15455 904 aaKnown RBP16.43■□□□□ 0.22
CTSD-201ENST00000236671 RASA4O43374 803 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 KRT16P08779 473 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 KCNA2P16389 499 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 TNNI1P19237 187 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 GNA15P30679 374 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 SSTR3P32745 418 aaPredicted RBP16.43■□□□□ 0.22
CTSD-201ENST00000236671 LIG4P49917 911 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 WDR4P57081 412 aaKnown RBP16.43■□□□□ 0.22
CTSD-201ENST00000236671 ACVR2BQ13705 512 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 DCAF15Q66K64 600 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 VSIG10LQ86VR7 867 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 KIF2BQ8N4N8 673 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 GLIS1Q8NBF1 620 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 GPRASP2Q96D09 838 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms