RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 TTPALQ9BTX7 342 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 INTS2Q9H0H0 1204 aaKnown RBP10.91□□□□□ -0.66
HMGCL-201ENST00000235958 CHST7Q9NS84 486 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 GCNT4Q9P109 453 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 PCDHB8Q9UN66 801 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 POLIQ9UNA4 740 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 LZTS1Q9Y250 596 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 PLXNA4Q9HCM2 1894 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 SYN3O14994 580 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 CLSTN1O94985 981 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 SOD2P04179 222 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 CYP11A1P05108 521 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 WEE2P0C1S8 567 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 FAM163BP0C2L3 166 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 P4HA1P13674 534 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 TKTP29401 623 aaKnown RBP10.9□□□□□ -0.66
HMGCL-201ENST00000235958 KLK7P49862 253 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 TNNC1P63316 161 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 UBE3AQ05086 875 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 CAMK1Q14012 370 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 MRPL58Q14197 206 aaKnown RBP10.9□□□□□ -0.66
HMGCL-201ENST00000235958 SYCP1Q15431 976 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 PTPN21Q16825 1174 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 HABP4Q5JVS0 413 aaKnown RBP10.9□□□□□ -0.66
HMGCL-201ENST00000235958 KLHDC7AQ5VTJ3 777 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 TRIM65Q6PJ69 517 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 RRAGAQ7L523 313 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 TMC7Q7Z402 723 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 METTL23Q86XA0 190 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 PDCL2Q8N4E4 241 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 TOP6BLQ8N6T0 577 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 MICAL1Q8TDZ2 1067 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 POF1BQ8WVV4 589 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 FAXDC2Q96IV6 333 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 NT5C1BQ96P26 610 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 ERGIC2Q96RQ1 377 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 XPO4Q9C0E2 1151 aaKnown RBP10.9□□□□□ -0.66
HMGCL-201ENST00000235958 SDCBP2Q9H190 292 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 TTYH1Q9H313 450 aaPredicted RBP10.9□□□□□ -0.66
HMGCL-201ENST00000235958 SIX2Q9NPC8 291 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 UBE2TQ9NPD8 197 aaPredicted RBP10.9□□□□□ -0.66
HMGCL-201ENST00000235958 STK39Q9UEW8 545 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 L1RE1Q9UN81 338 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 SIK3Q9Y2K2 1263 aa10.9□□□□□ -0.66
HMGCL-201ENST00000235958 VWA8A3KMH1 1905 aa10.9□□□□□ -0.67
HMGCL-201ENST00000235958 ARHGEF37A1IGU5 675 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 C2CD2LO14523 706 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 LILRB3O75022 631 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 OAZ2O95190 189 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 CTSAP10619 480 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 ODC1P11926 461 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 TYMPP19971 482 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 LMO2P25791 158 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 GNL1P36915 607 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-201ENST00000235958 DSG1Q02413 1049 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 BMS1Q14692 1282 aaKnown RBP10.89□□□□□ -0.67
HMGCL-201ENST00000235958 RTP2Q5QGT7 225 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 VARS2Q5ST30 1063 aaKnown RBP10.89□□□□□ -0.67
HMGCL-201ENST00000235958 OVOS1Q6IE37 1185 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 GJB7Q6PEY0 223 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 SARM1Q6SZW1 724 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-201ENST00000235958 ARHGEF19Q8IW93 802 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 TMEM86AQ8N2M4 240 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 PPM1KQ8N3J5 372 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 MRPL43Q8N983 215 aaKnown RBP10.89□□□□□ -0.67
HMGCL-201ENST00000235958 LNX1Q8TBB1 728 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-201ENST00000235958 AUTS2Q8WXX7 1259 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 RIN2Q8WYP3 895 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-201ENST00000235958 PCMTD1Q96MG8 357 aaPredicted RBP10.89□□□□□ -0.67
HMGCL-201ENST00000235958 MRPL45Q9BRJ2 306 aaKnown RBP10.89□□□□□ -0.67
HMGCL-201ENST00000235958 BCO2Q9BYV7 579 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 TRIM5Q9C035 493 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 NIF3L1Q9GZT8 377 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 CYP3A43Q9HB55 503 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 PLCB1Q9NQ66 1216 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 MRPL17Q9NRX2 175 aaKnown RBP10.89□□□□□ -0.67
HMGCL-201ENST00000235958 DSEQ9UL01 958 aa10.89□□□□□ -0.67
HMGCL-201ENST00000235958 PRRC2BQ5JSZ5 2229 aaKnown RBP10.88□□□□□ -0.67
HMGCL-201ENST00000235958 TMEM265A0A087WTH1 108 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 A0A1W2PQC6 194 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 GABRDO14764 452 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 CBFA2T2O43439 604 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 TBC1D4O60343 1298 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 LPXNO60711 386 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 TACC1O75410 805 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 NOL4O94818 638 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 PDGFRBP09619 1106 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 ASPAP45381 313 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 RAP1GAPP47736 663 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 LHX1P48742 406 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 GLUD2P49448 558 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 YWHAHQ04917 246 aaPredicted RBP10.88□□□□□ -0.67
HMGCL-201ENST00000235958 CUL2Q13617 745 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 GRIN2CQ14957 1233 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 PRSS55Q6UWB4 352 aaPredicted RBP10.88□□□□□ -0.67
HMGCL-201ENST00000235958 SCARA5Q6ZMJ2 495 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 ANKS3Q6ZW76 656 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 OSTM1Q86WC4 334 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 GPR65Q8IYL9 337 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms