RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 THRAP10827 490 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 SEC23AQ15436 765 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 PHKG1Q16816 387 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 TRIM59Q8IWR1 403 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 CHPT1Q8WUD6 406 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 RFFLQ8WZ73 363 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 SGF29Q96ES7 293 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 TSG101Q99816 390 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 THTPAQ9BU02 230 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 TRIM55Q9BYV6 548 aa13.71□□□□□ -0.21
MSH2-201ENST00000233146 RTL9Q8NET4 1388 aa13.71□□□□□ -0.22
MSH2-201ENST00000233146 BCORQ6W2J9 1755 aa13.71□□□□□ -0.22
MSH2-201ENST00000233146 A0A1W2PQ67 120 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 ATP5J2-PTCD1G3V325 749 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 PTCD1O75127 700 aaKnown RBP13.7□□□□□ -0.22
MSH2-201ENST00000233146 EEF2P13639 858 aaKnown RBP13.7□□□□□ -0.22
MSH2-201ENST00000233146 TATP17735 454 aaPredicted RBP13.7□□□□□ -0.22
MSH2-201ENST00000233146 GSSP48637 474 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 CD300CQ08708 224 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 SEPT6Q14141 434 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 ZNF804AQ7Z570 1209 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 PRUNE1Q86TP1 453 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 TTC39CQ8N584 583 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 BORCS5Q969J3 196 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 CEP44Q9C0F1 390 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 PIK3CDO00329 1044 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 FCHO1O14526 889 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 ZBED4O75132 1171 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 C6orf222P0C671 652 aaPredicted RBP13.7□□□□□ -0.22
MSH2-201ENST00000233146 ITIH2P19823 946 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 PIK3CAP42336 1068 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 FKBP3Q00688 224 aaKnown RBP13.7□□□□□ -0.22
MSH2-201ENST00000233146 EFTUD2Q15029 972 aaKnown RBP eCLIP13.7□□□□□ -0.223e-6■□□□□ 9.1
MSH2-201ENST00000233146 DLGAP5Q15398 846 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 LRRC49Q8IUZ0 686 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 ACTRT2Q8TDY3 377 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 GCNAQ96QF7 691 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 ZNF532Q9HCE3 1301 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 PVALEFA0A1B0GWK0 134 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 ANKRD34BA5PLL1 514 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 TMEM114B3SHH9 223 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 NR1D2Q14995 579 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 ISLR2Q6UXK2 745 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 ZNF276Q8N554 614 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 CTRCQ99895 268 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 TMEM120AQ9BXJ8 343 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 KLC2Q9H0B6 622 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 MAN1C1Q9NR34 630 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 AKAP11Q9UKA4 1901 aa13.7□□□□□ -0.22
MSH2-201ENST00000233146 CAPN14A8MX76 684 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 TYROBPO43914 113 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 ADAMTS2O95450 1211 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 CA4P22748 312 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 KCNJ1P48048 391 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 MARSP56192 900 aaKnown RBP13.69□□□□□ -0.22
MSH2-201ENST00000233146 ZNF829Q3KNS6 432 aaPredicted RBP13.69□□□□□ -0.22
MSH2-201ENST00000233146 DNAL1Q4LDG9 190 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 RWDD4Q6NW29 188 aaKnown RBP13.69□□□□□ -0.22
MSH2-201ENST00000233146 VPS36Q86VN1 386 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 TMCO5AQ8N6Q1 288 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 SLC43A3Q8NBI5 491 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 CXorf38Q8TB03 319 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 POP1Q99575 1024 aaKnown RBP13.69□□□□□ -0.22
MSH2-201ENST00000233146 PRPF18Q99633 342 aaKnown RBP13.69□□□□□ -0.22
MSH2-201ENST00000233146 UNKQ9C0B0 810 aaKnown RBP13.69□□□□□ -0.22
MSH2-201ENST00000233146 TECPR2O15040 1411 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 RSPH10B2B2RC85 870 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 AQP9O43315 295 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 RSPH10BP0C881 870 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 ACTN1P12814 892 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 TRIP10Q15642 601 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 ZNF530Q6P9A1 599 aaPredicted RBP13.69□□□□□ -0.22
MSH2-201ENST00000233146 KSR1Q8IVT5 923 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 GLIS3Q8NEA6 775 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 USP6NLQ92738 828 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 PLEKHA8Q96JA3 519 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 MAELQ96JY0 434 aaKnown RBP13.69□□□□□ -0.22
MSH2-201ENST00000233146 RANBP9Q96S59 729 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 NUP85Q9BW27 656 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 KANSL2Q9H9L4 492 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 GID8Q9NWU2 228 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 IGSF9BQ9UPX0 1349 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 PFDN6O15212 129 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 CYTH3O43739 400 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 FBXO21O94952 628 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 TMEM253P0C7T8 217 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 UCHL3P15374 230 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 GCAP28676 217 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 HSD17B4P51659 736 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 PPP2R2DQ66LE6 453 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 LVRNQ6Q4G3 990 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 LRP10Q7Z4F1 713 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 OXNAD1Q96HP4 312 aaPredicted RBP13.69□□□□□ -0.22
MSH2-201ENST00000233146 KIAA1586Q9HCI6 787 aa13.69□□□□□ -0.22
MSH2-201ENST00000233146 TCRBV5S4A2TA0A5A2 114 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 RCVRNP35243 200 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 MCAMP43121 646 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 KPNA1P52294 538 aaPredicted RBP13.68□□□□□ -0.22
MSH2-201ENST00000233146 TUBA4AP68366 448 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 LRP8Q14114 963 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms