RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 BUB1O43683 1085 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 FAM189A1O60320 539 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 C22orf31O95567 290 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 HLA-DRAP01903 254 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 CHRNA1P02708 482 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 CXCL10P02778 98 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 CYP1A2P05177 515 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 RPLP2P05387 115 aaKnown RBP11.4□□□□□ -0.58
CDCA3-201ENST00000229265 CA3P07451 260 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 CLTAP09496 248 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 CTSHP09668 335 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 DLATP10515 647 aaKnown RBP11.4□□□□□ -0.58
CDCA3-201ENST00000229265 INSRRP14616 1297 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 MATR3P43243 847 aaKnown RBP eCLIP11.4□□□□□ -0.58
CDCA3-201ENST00000229265 WDR5P61964 334 aaKnown RBP11.4□□□□□ -0.58
CDCA3-201ENST00000229265 ATF7IP2Q5U623 682 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 NT5DC3Q86UY8 548 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 RPUSD2Q8IZ73 545 aaKnown RBP11.4□□□□□ -0.58
CDCA3-201ENST00000229265 NME8Q8N427 588 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 MAFAQ8NHW3 353 aaPredicted RBP11.4□□□□□ -0.58
CDCA3-201ENST00000229265 OLIG1Q8TAK6 271 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 LINC01599Q8WXQ3 324 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 DDX1Q92499 740 aaKnown RBP11.4□□□□□ -0.58
CDCA3-201ENST00000229265 PLVAPQ9BX97 442 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 VRTNQ9H8Y1 702 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 PLEKHA5Q9HAU0 1116 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 AVENQ9NQS1 362 aaPredicted RBP11.4□□□□□ -0.58
CDCA3-201ENST00000229265 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.4□□□□□ -0.58
CDCA3-201ENST00000229265 GTF3C4Q9UKN8 822 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 TFR2Q9UP52 801 aa11.4□□□□□ -0.58
CDCA3-201ENST00000229265 V9GYY5 206 aaPredicted RBP11.4□□□□□ -0.58
CDCA3-201ENST00000229265 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 ZBBXA8MT70 800 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 PITPNM1O00562 1244 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 ABLIM1O14639 778 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 SRGAP2O75044 1071 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 STAU1O95793 577 aaKnown RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 ASS1P00966 412 aaKnown RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 LINC00271P0C7V0 271 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 SRGAP2CP0DJJ0 459 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 SELPP16109 830 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 CHRNB2P17787 502 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 AXLP30530 894 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 SLC1A1P43005 524 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 ACOT2P49753 483 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 NLRP11P59045 1033 aaKnown RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 TNNC1P63316 161 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 TAP1Q03518 808 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 PTPN11Q06124 597 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 MGAT3Q09327 533 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 CUL2Q13617 745 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 ENOX2Q16206 610 aaKnown RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 BEND6Q5SZJ8 279 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 FAM117BQ6P1L5 589 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 PSRC1Q6PGN9 363 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 MTHFD1LQ6UB35 978 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 MAATS1Q7Z4T9 603 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 DAAM2Q86T65 1068 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 RHPN2Q8IUC4 686 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 KRT222Q8N1A0 295 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 UBL4BQ8N7F7 174 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 LRRN4CLQ8ND94 238 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 ZSWIM2Q8NEG5 633 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 DBF4BQ8NFT6 615 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 TATDN2Q93075 761 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 RUNDC3BQ96NL0 473 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 POP1Q99575 1024 aaKnown RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 COL25A1Q9BXS0 654 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 HAPLN2Q9GZV7 340 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 CDHR5Q9HBB8 845 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 PDE11AQ9HCR9 933 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 MRPL47Q9HD33 250 aaKnown RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 KIAA1257Q9ULG3 409 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 DERAQ9Y315 318 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 MYH11P35749 1972 aa11.39□□□□□ -0.59
CDCA3-201ENST00000229265 TCF20Q9UGU0 1960 aaKnown RBP11.39□□□□□ -0.59
CDCA3-201ENST00000229265 KAT6AQ92794 2004 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 SMIM35A0A1B0GVV1 85 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 CCDC66A2RUB6 948 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 CYP26A1O43174 497 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 PHACTR2O75167 634 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 TNNC2P02585 160 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 CYP1A1P04798 512 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-201ENST00000229265 GNAT1P11488 350 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 UNGP13051 313 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-201ENST00000229265 ATP2A2P16615 1042 aaKnown RBP11.38□□□□□ -0.59
CDCA3-201ENST00000229265 FMO1Q01740 532 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 MBTD1Q05BQ5 628 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 PTK7Q13308 1070 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 NNTQ13423 1086 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 BIRC3Q13489 604 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 NCOA4Q13772 614 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 CCDC85BQ15834 202 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-201ENST00000229265 LONRF2Q1L5Z9 754 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 TDRD10Q5VZ19 366 aaKnown RBP11.38□□□□□ -0.59
CDCA3-201ENST00000229265 FAM43BQ6ZT52 329 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-201ENST00000229265 NOP9Q86U38 636 aaKnown RBP11.38□□□□□ -0.59
CDCA3-201ENST00000229265 RTN4RL1Q86UN2 441 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-201ENST00000229265 HERC6Q8IVU3 1022 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms