RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 HEMGNQ9BXL5 484 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 NIF3L1Q9GZT8 377 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 GGA3Q9NZ52 723 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 GPRC5DQ9NZD1 345 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 FZD1Q9UP38 647 aa23.3■■□□□ 1.32
SMARCD2-201ENST00000225742 ZBTB7AO95365 584 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 CDH5P33151 784 aaPredicted RBP23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 YWHAEP62258 255 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 NFX1Q12986 1120 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 LLGL1Q15334 1064 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 DUOXA2Q1HG44 320 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 C2CD6Q53TS8 623 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 TRPM4Q8TD43 1214 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 PRPF31Q8WWY3 499 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 ACO2Q99798 780 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 MTFR1LQ9H019 292 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 LGALS13Q9UHV8 139 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 USTQ9Y2C2 406 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 CD2APQ9Y5K6 639 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 SOWAHBA6NEL2 793 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 USP2O75604 605 aaPredicted RBP23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 TJP3O95049 919 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 ACSL3O95573 720 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 ABHD2P08910 425 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 KLRC2P26717 231 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 SSR1P43307 286 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 JPH2Q9BR39 696 aaPredicted RBP23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 DDX56Q9NY93 547 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 NINJ2Q9NZG7 142 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 PCDHGC3Q9UN70 934 aa23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 DRG1Q9Y295 367 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-201ENST00000225742 PTPRFP10586 1907 aa23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 TCRBV5S1A1TA0A578 114 aa23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 TCF7P36402 384 aaPredicted RBP23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 PIGHQ14442 188 aaPredicted RBP23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 STAT4Q14765 748 aa23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 LONRF1Q17RB8 773 aa23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 IZUMO3Q5VZ72 239 aa23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 HIBCHQ6NVY1 386 aaPredicted RBP23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 DNAJC24Q6P3W2 148 aa23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 ARHGEF2Q92974 986 aaKnown RBP23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 SLITRK1Q96PX8 696 aa23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 CPSF3Q9UKF6 684 aaKnown RBP23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 SNCAIPQ9Y6H5 919 aa23.28■■□□□ 1.32
SMARCD2-201ENST00000225742 LGR5O75473 907 aa23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 HARSP12081 509 aaKnown RBP23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 EIF4BP23588 611 aaKnown RBP23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 TRIP13Q15645 432 aaPredicted RBP23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 ANKRD20A8PQ5CZ79 823 aa23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 CCDC13Q8IYE1 715 aa23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 RIBC1Q8N443 379 aaPredicted RBP23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 NIPA2Q8N8Q9 360 aa23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 TCHPQ9BT92 498 aa23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 OSBPL7Q9BZF2 842 aa23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 SAMD15Q9P1V8 674 aa23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 BTBD7Q9P203 1132 aa23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 LRRC37A2A6NM11 1700 aa23.27■■□□□ 1.32
SMARCD2-201ENST00000225742 IGKV6-21A0A0C4DH24 114 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 LIASO43766 372 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 PRKCBP05771 671 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 CD58P19256 250 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 TRPC3Q13507 836 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 MAPK6Q16659 721 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 KYNUQ16719 465 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 EAPPQ56P03 285 aaPredicted RBP23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 PLPPR4Q7Z2D5 763 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 ZCCHC9Q8N567 271 aaKnown RBP23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 FAXDC2Q96IV6 333 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 PRMT1Q99873 361 aaKnown RBP23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 SPATC1LQ9H0A9 340 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 CEP83Q9Y592 693 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 ACTL7BQ9Y614 415 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 CCT8L1PA6NM43 557 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 O00370 1275 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 CST3P01034 146 aaPredicted RBP23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 MYL6P60660 151 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 PPARDQ03181 441 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 LAMTOR4Q0VGL1 99 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 LRRC34Q8IZ02 419 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 CCT6BQ92526 530 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 FAM212AQ96EL1 285 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 CISHQ9NSE2 258 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 STRIP2Q9ULQ0 834 aa23.26■■□□□ 1.31
SMARCD2-201ENST00000225742 ABLIM1O14639 778 aa23.25■■□□□ 1.31
SMARCD2-201ENST00000225742 KRT1P04264 644 aa23.25■■□□□ 1.31
SMARCD2-201ENST00000225742 HNRNPH1P31943 449 aaKnown RBP23.25■■□□□ 1.31
SMARCD2-201ENST00000225742 TNFSF9P41273 254 aa23.25■■□□□ 1.31
SMARCD2-201ENST00000225742 PPP1R15BQ5SWA1 713 aa23.25■■□□□ 1.31
SMARCD2-201ENST00000225742 TREML2Q5T2D2 321 aa23.25■■□□□ 1.31
SMARCD2-201ENST00000225742 GSTA5Q7RTV2 222 aa23.25■■□□□ 1.31
SMARCD2-201ENST00000225742 CDH16O75309 829 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 TFDP1Q14186 410 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 SEZ6Q53EL9 994 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 DAB2IPQ5VWQ8 1189 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 FBXW10Q5XX13 1052 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 DCUN1D2Q6PH85 259 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 SPOCD1Q6ZMY3 1216 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 TSHZ1Q6ZSZ6 1077 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 ZBTB33Q86T24 672 aa23.24■■□□□ 1.31
SMARCD2-201ENST00000225742 TTC25Q96NG3 672 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms