RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ARL4DP49703 201 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 PCNX4Q63HM2 1172 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 ZFPM1Q8IX07 1006 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 ZNF507Q8TCN5 953 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 E2F8A0AVK6 867 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 CTXN3Q4LDR2 81 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 EFHC1Q5JVL4 640 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 DNAJB3Q8WWF6 145 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 USH1CQ9Y6N9 552 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 VWA5AO00534 786 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 MAP4P27816 1152 aaKnown RBP19.37■□□□□ 0.69
CLIP2-201ENST00000223398 RAP1GAPP47736 663 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 C2CD6Q53TS8 623 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 MPZL3Q6UWV2 235 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 NUDCD3Q8IVD9 361 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 POP1Q99575 1024 aaKnown RBP19.37■□□□□ 0.69
CLIP2-201ENST00000223398 LATS2Q9NRM7 1088 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 CPSF2Q9P2I0 782 aaKnown RBP19.37■□□□□ 0.69
CLIP2-201ENST00000223398 COL5A2P05997 1499 aaPredicted RBP19.37■□□□□ 0.69
CLIP2-201ENST00000223398 FAM187AA6NFU0 413 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 ZNF197O14709 1029 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 RAG1P15918 1043 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 MFN1Q8IWA4 741 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 RAB42Q8N4Z0 105 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 SHCBP1Q8NEM2 672 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 CYTH2Q99418 400 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 SERPINI1Q99574 410 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 TRIM51Q9BSJ1 452 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 CATSPERBQ9H7T0 1116 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 BCL9O00512 1426 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 GGCXP38435 758 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 PDAP1Q13442 181 aaKnown RBP19.36■□□□□ 0.69
CLIP2-201ENST00000223398 CCDC157Q569K6 752 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 TAF1DQ9H5J8 278 aaPredicted RBP19.36■□□□□ 0.69
CLIP2-201ENST00000223398 SMYD3Q9H7B4 428 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 AGO4Q9HCK5 861 aaKnown RBP19.36■□□□□ 0.69
CLIP2-201ENST00000223398 URODP06132 367 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 CKMP06732 381 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 MBL2P11226 248 aaPredicted RBP19.36■□□□□ 0.69
CLIP2-201ENST00000223398 NAMPTP43490 491 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 DACT2Q5SW24 774 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 BTBD6Q96KE9 485 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 DDIT4Q9NX09 232 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 PGM5Q15124 567 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 TMC7Q7Z402 723 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 CBWD1Q9BRT8 395 aa19.36■□□□□ 0.69
CLIP2-201ENST00000223398 UPF3AQ9H1J1 476 aaKnown RBP19.36■□□□□ 0.69
CLIP2-201ENST00000223398 MGEA5O60502 916 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 POMCP01189 267 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 CUL2Q13617 745 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 SNCBQ16143 134 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 CCDC138Q96M89 665 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 TTLL13PA6NNM8 815 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 M0QYT0 321 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 NDUFS3O75489 264 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 MYO1DO94832 1006 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 INSRRP14616 1297 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 EEF1B2P24534 225 aaKnown RBP19.35■□□□□ 0.69
CLIP2-201ENST00000223398 MORF4L2Q15014 288 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 FBXO32Q969P5 355 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 KIAA1683Q9H0B3 1180 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 XPNPEP3Q9NQH7 507 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 FBXL5Q9UKA1 691 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 CXCL11O14625 94 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 EPHB2P29323 1055 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 IFNA8P32881 189 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 METTL7BQ6UX53 244 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 HS6ST3Q8IZP7 471 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 RNF208Q9H0X6 261 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 C17orf75Q9HAS0 396 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.35■□□□□ 0.69
CLIP2-201ENST00000223398 LRRIQ1Q96JM4 1722 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 COMTP21964 271 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 KLHDC7AQ5VTJ3 777 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 TRAPPC12Q8WVT3 735 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 RPRD1AQ96P16 312 aaPredicted RBP19.35■□□□□ 0.69
CLIP2-201ENST00000223398 GOLPH3Q9H4A6 298 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 TMEM39AQ9NV64 488 aa19.35■□□□□ 0.69
CLIP2-201ENST00000223398 WTIPA6NIX2 430 aaPredicted RBP19.34■□□□□ 0.69
CLIP2-201ENST00000223398 H7C4K7 107 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 HIST1H2AGP0C0S8 130 aaPredicted RBP19.34■□□□□ 0.69
CLIP2-201ENST00000223398 HIST1H2ADP20671 130 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 CNTN2Q02246 1040 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 SPATA18Q8TC71 538 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 PTPRN2Q92932 1015 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 ELMO2Q96JJ3 720 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 HIST1H2AHQ96KK5 128 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 WDR24Q96S15 920 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 HIST1H2AJQ99878 128 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 H2AFJQ9BTM1 129 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 XPO7Q9UIA9 1087 aaKnown RBP19.34■□□□□ 0.69
CLIP2-201ENST00000223398 TBKBP1A7MCY6 615 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 ENDOD1O94919 500 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 THP07101 528 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 ARHGDIAP52565 204 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 CCDC33Q8N5R6 958 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 GPR63Q9BZJ6 419 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.34■□□□□ 0.69
CLIP2-201ENST00000223398 GHRP10912 638 aa19.34■□□□□ 0.69
CLIP2-201ENST00000223398 SNRPFP62306 86 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms