RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SRGNP10124 158 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 CYP2C8P10632 490 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 GTF2H1P32780 548 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 ZNF677Q86XU0 584 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 ACER1Q8TDN7 264 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 SNX5Q9Y5X3 404 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 CROCC2H7BZ55 1655 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 CCDC78A2IDD5 438 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 OOSP2Q86WS3 158 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 ELMO2Q96JJ3 720 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 C5orf58C9J3I9 102 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 CCDC22O60826 627 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 EGFRP00533 1210 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 KRT72Q14CN4 511 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 KIZQ2M2Z5 673 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 SLC25A41Q8N5S1 370 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 AGR3Q8TD06 166 aa19.85■□□□□ 0.77
SMPD3-201ENST00000219334 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.84■□□□□ 0.77
SMPD3-201ENST00000219334 URODP06132 367 aa19.84■□□□□ 0.77
SMPD3-201ENST00000219334 ZNF177Q13360 481 aaPredicted RBP19.84■□□□□ 0.77
SMPD3-201ENST00000219334 MUTP22033 750 aa19.84■□□□□ 0.77
SMPD3-201ENST00000219334 SYCP2LQ5T4T6 812 aa19.84■□□□□ 0.77
SMPD3-201ENST00000219334 HS6ST3Q8IZP7 471 aa19.84■□□□□ 0.77
SMPD3-201ENST00000219334 L3MBTL3Q96JM7 780 aaPredicted RBP19.84■□□□□ 0.77
SMPD3-201ENST00000219334 POLLQ9UGP5 575 aa19.84■□□□□ 0.77
SMPD3-201ENST00000219334 TBX20Q9UMR3 447 aa19.84■□□□□ 0.77
SMPD3-201ENST00000219334 ETFBP38117 255 aa19.84■□□□□ 0.77
SMPD3-201ENST00000219334 CDR2LQ86X02 465 aaPredicted RBP19.84■□□□□ 0.77
SMPD3-201ENST00000219334 CPA4Q9UI42 421 aa19.84■□□□□ 0.77
SMPD3-201ENST00000219334 ATN1P54259 1190 aaPredicted RBP19.84■□□□□ 0.77
SMPD3-201ENST00000219334 CATSPER3Q86XQ3 398 aa19.84■□□□□ 0.77
SMPD3-201ENST00000219334 SHCBP1Q8NEM2 672 aa19.84■□□□□ 0.77
SMPD3-201ENST00000219334 PAK5Q9P286 719 aa19.84■□□□□ 0.77
SMPD3-201ENST00000219334 PGK2P07205 417 aa19.83■□□□□ 0.77
SMPD3-201ENST00000219334 MCF2P10911 925 aa19.83■□□□□ 0.77
SMPD3-201ENST00000219334 YY1P25490 414 aa19.83■□□□□ 0.77
SMPD3-201ENST00000219334 BEND6Q5SZJ8 279 aaPredicted RBP19.83■□□□□ 0.77
SMPD3-201ENST00000219334 SAMD3Q8N6K7 520 aa19.83■□□□□ 0.77
SMPD3-201ENST00000219334 IPMKQ8NFU5 416 aa19.83■□□□□ 0.77
SMPD3-201ENST00000219334 NSMCE4AQ9NXX6 385 aa19.83■□□□□ 0.77
SMPD3-201ENST00000219334 CDV3Q9UKY7 258 aaKnown RBP19.83■□□□□ 0.77
SMPD3-201ENST00000219334 PAN2Q504Q3 1202 aaKnown RBP19.83■□□□□ 0.77
SMPD3-201ENST00000219334 GSPT2Q8IYD1 628 aaKnown RBP19.83■□□□□ 0.77
SMPD3-201ENST00000219334 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.83■□□□□ 0.77
SMPD3-201ENST00000219334 WARS2Q9UGM6 360 aaKnown RBP19.83■□□□□ 0.77
SMPD3-201ENST00000219334 FHOD1Q9Y613 1164 aa19.83■□□□□ 0.77
SMPD3-201ENST00000219334 GLRA4Q5JXX5 417 aa19.83■□□□□ 0.76
SMPD3-201ENST00000219334 OGTO15294 1046 aa19.83■□□□□ 0.76
SMPD3-201ENST00000219334 KPNA6O60684 536 aa19.83■□□□□ 0.76
SMPD3-201ENST00000219334 INTS5Q6P9B9 1019 aaKnown RBP19.83■□□□□ 0.76
SMPD3-201ENST00000219334 FBXO38Q6PIJ6 1188 aa19.83■□□□□ 0.76
SMPD3-201ENST00000219334 CINPQ9BW66 212 aaPredicted RBP19.83■□□□□ 0.76
SMPD3-201ENST00000219334 FAM129AQ9BZQ8 928 aa19.83■□□□□ 0.76
SMPD3-201ENST00000219334 FBXL5Q9UKA1 691 aa19.83■□□□□ 0.76
SMPD3-201ENST00000219334 MSH4O15457 936 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 GGCXP38435 758 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 PPP3CCP48454 512 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 SERPINB9P50453 376 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 PSD3Q9NYI0 1048 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 ATP11BQ9Y2G3 1177 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 ATP1A1P05023 1023 aaKnown RBP19.82■□□□□ 0.76
SMPD3-201ENST00000219334 ANTXR2P58335 489 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 PRKCQQ04759 706 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 TARSL2A2RTX5 802 aaKnown RBP19.82■□□□□ 0.76
SMPD3-201ENST00000219334 ANGPT2O15123 496 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 EFCAB14O75071 495 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 TRIM48Q8IWZ4 208 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 CD274Q9NZQ7 290 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 XPO7Q9UIA9 1087 aaKnown RBP19.82■□□□□ 0.76
SMPD3-201ENST00000219334 TTLL13PA6NNM8 815 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 PNMA6AP0CW24 399 aaPredicted RBP19.82■□□□□ 0.76
SMPD3-201ENST00000219334 SPATA18Q8TC71 538 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 USP13Q92995 863 aaPredicted RBP19.82■□□□□ 0.76
SMPD3-201ENST00000219334 WWP1Q9H0M0 922 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 DPP7Q9UHL4 492 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 EPHB2P29323 1055 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 FBXO16Q8IX29 292 aaPredicted RBP19.82■□□□□ 0.76
SMPD3-201ENST00000219334 YY1AP1Q9H869 796 aa19.82■□□□□ 0.76
SMPD3-201ENST00000219334 CKMP06732 381 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 RPL10AP62906 217 aaKnown RBP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 POLD3Q15054 466 aaPredicted RBP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 SNX31Q8N9S9 440 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 SPATA4Q8NEY3 305 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 DACH2Q96NX9 599 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 RPRD1AQ96P16 312 aaPredicted RBP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 PI4K2AQ9BTU6 479 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 CRLS1Q9UJA2 301 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 PHF2O75151 1096 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 AP1G2O75843 785 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 MBL2P11226 248 aaPredicted RBP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 ACO1P21399 889 aaKnown RBP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 KLRK1P26718 216 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 CLCN3P51790 818 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 ZRANB3Q5FWF4 1079 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 ST13P4Q8IZP2 240 aaPredicted RBP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 RBM15Q96T37 977 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 C20orf96Q9NUD7 363 aaPredicted RBP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 SLC9A1P19634 815 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 BRD2P25440 801 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms