RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 PPEF2O14830 753 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 CHADO15335 359 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 PIGRP01833 764 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 TYMPP19971 482 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 CXCL12P48061 93 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 EPHB3P54753 998 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 SATB1Q01826 763 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 LMNB2Q03252 620 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 MYBPC2Q14324 1141 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 ENOX2Q16206 610 aaKnown RBP17.13■□□□□ 0.33
NME3-201ENST00000219302 STXBP5Q5T5C0 1151 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 SPATA1Q5VX52 437 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 DSTYKQ6XUX3 929 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 GAREM2Q75VX8 874 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 DNAJB7Q7Z6W7 309 aaPredicted RBP17.13■□□□□ 0.33
NME3-201ENST00000219302 ARID3BQ8IVW6 561 aaPredicted RBP17.13■□□□□ 0.33
NME3-201ENST00000219302 ATAD1Q8NBU5 361 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 TSPAN18Q96SJ8 248 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 MYH11P35749 1972 aa17.13■□□□□ 0.33
NME3-201ENST00000219302 A0A0B4J269 797 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 MTMR11A4FU01 709 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 VWA3AA6NCI4 1184 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 H0YCG3 227 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 MATR3P43243 847 aaKnown RBP eCLIP17.12■□□□□ 0.33
NME3-201ENST00000219302 LILRA4P59901 499 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 PPP2R3AQ06190 1150 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 PLD1Q13393 1074 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 PPP2R5DQ14738 602 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 KYAT1Q16773 422 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 ERICH6BQ5W0A0 696 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 ARL6IP4Q66PJ3 421 aaKnown RBP17.12■□□□□ 0.33
NME3-201ENST00000219302 OVOS1Q6IE37 1185 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 USP37Q86T82 979 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 GPIHBP1Q8IV16 184 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 SPEM1Q8N4L4 309 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 TTC9BQ8N6N2 239 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 LRRC15Q8TF66 581 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 PSMG2Q969U7 264 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 MSANTD3Q96H12 275 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 TMEM209Q96SK2 561 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 SLITRK6Q9H5Y7 841 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 TBX20Q9UMR3 447 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 ASB3Q9Y575 518 aa17.12■□□□□ 0.33
NME3-201ENST00000219302 OGTO15294 1046 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 XPOTO43592 962 aaKnown RBP17.11■□□□□ 0.33
NME3-201ENST00000219302 HRO43593 1189 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 ALDH1A3P47895 512 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 SOX9P48436 509 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 DMWDQ09019 674 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 LPAL2Q16609 132 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 LAIR1Q6GTX8 287 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 C1orf228Q6PIY5 440 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 TXNDC11Q6PKC3 985 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 CSGALNACT1Q8TDX6 532 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 BICD1Q96G01 975 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 SENP8Q96LD8 212 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 C8orf33Q9H7E9 229 aaPredicted RBP17.11■□□□□ 0.33
NME3-201ENST00000219302 RPF1Q9H9Y2 349 aaKnown RBP17.11■□□□□ 0.33
NME3-201ENST00000219302 RBM12Q9NTZ6 932 aaKnown RBP17.11■□□□□ 0.33
NME3-201ENST00000219302 HSFX1Q9UBD0 423 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 GMEB2Q9UKD1 530 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 CPSF3Q9UKF6 684 aaKnown RBP17.11■□□□□ 0.33
NME3-201ENST00000219302 ODF2LQ9ULJ1 636 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 USP18Q9UMW8 372 aa17.11■□□□□ 0.33
NME3-201ENST00000219302 MYBPHLA2RUH7 354 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 SLC38A8A6NNN8 435 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 K7ESF4 209 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 PIRO00625 290 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 SOAT2O75908 522 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 PAPSS2O95340 614 aaPredicted RBP17.1■□□□□ 0.33
NME3-201ENST00000219302 WEE1P30291 646 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 LIG4P49917 911 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 ZNF131P52739 623 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 SPEM2Q0P670 501 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 MCTP1Q6DN14 999 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 JADE1Q6IE81 842 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 SLC39A4Q6P5W5 647 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 YAF2Q8IY57 180 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 FIZ1Q96SL8 496 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 REEP2Q9BRK0 252 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 RTKNQ9BST9 563 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 OBP2AQ9NY56 170 aa17.1■□□□□ 0.33
NME3-201ENST00000219302 CDV3Q9UKY7 258 aaKnown RBP17.1■□□□□ 0.33
NME3-201ENST00000219302 CACNA1BQ00975 2339 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 EPG5Q9HCE0 2579 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 ANO9A1A5B4 782 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 DCDC2BA2VCK2 349 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 CHURC1-FNTBB4DL54 471 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 SPECC1L-ADORA2AF8WAN1 911 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 HNRNPDLO14979 420 aaKnown RBP17.09■□□□□ 0.33
NME3-201ENST00000219302 SLC26A4O43511 780 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 CYP11A1P05108 521 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 RETP07949 1114 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 SCP2P22307 547 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 PAX3P23760 479 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 CTHP32929 405 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 FNTBP49356 437 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 KPNA1P52294 538 aaPredicted RBP17.09■□□□□ 0.33
NME3-201ENST00000219302 C9orf57Q5W0N0 161 aa17.09■□□□□ 0.33
NME3-201ENST00000219302 RALGPS2Q86X27 583 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms