RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 MKRN4PQ13434 485 aaPredicted RBP9.94□□□□□ -0.82
CCDC113-201ENST00000219299 TRIM72Q6ZMU5 477 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 CELF4Q9BZC1 486 aaKnown RBP9.94□□□□□ -0.82
CCDC113-201ENST00000219299 PALMO75781 387 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 BMP6P22004 513 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 PON1P27169 355 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 PNPLA4P41247 253 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 IL9RQ01113 521 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 MAP3K10Q02779 954 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 SNX1Q13596 522 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 MYBPC2Q14324 1141 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 DBN1Q16643 649 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 HIBCHQ6NVY1 386 aaPredicted RBP9.94□□□□□ -0.82
CCDC113-201ENST00000219299 TMC2Q8TDI7 906 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 HSPH1Q92598 858 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 KRT12Q99456 494 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 CGRRF1Q99675 332 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 NUP85Q9BW27 656 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 CREBZFQ9NS37 354 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 PPFIA2O75334 1257 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 GTF2H1P32780 548 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 ADCY8P40145 1251 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 MGAT5BQ3V5L5 792 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 BBOF1Q8ND07 529 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 ZNF564Q8TBZ8 553 aaPredicted RBP9.94□□□□□ -0.82
CCDC113-201ENST00000219299 LRRC8CQ8TDW0 803 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 STAP1Q9ULZ2 295 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 PRRG1O14668 218 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 RECQL4O94761 1208 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 ZRANB2O95218 330 aaKnown RBP eCLIP9.94□□□□□ -0.82
CCDC113-201ENST00000219299 ARIH2O95376 493 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 NR1D1P20393 614 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 IRX5P78411 483 aaPredicted RBP9.94□□□□□ -0.82
CCDC113-201ENST00000219299 CUL2Q13617 745 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 ARL13BQ3SXY8 428 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 RWDD4Q6NW29 188 aaKnown RBP9.94□□□□□ -0.82
CCDC113-201ENST00000219299 PARD3BQ8TEW8 1205 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 LENG9Q96B70 501 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 SEPT5Q99719 369 aaPredicted RBP9.94□□□□□ -0.82
CCDC113-201ENST00000219299 COLEC11Q9BWP8 271 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 EPB41L5Q9HCM4 733 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 NOP53Q9NZM5 478 aaKnown RBP9.94□□□□□ -0.82
CCDC113-201ENST00000219299 CPSF3Q9UKF6 684 aaKnown RBP9.94□□□□□ -0.82
CCDC113-201ENST00000219299 PTPN22Q9Y2R2 807 aa9.94□□□□□ -0.82
CCDC113-201ENST00000219299 TIMM13Q9Y5L4 95 aaPredicted RBP9.94□□□□□ -0.82
CCDC113-201ENST00000219299 HMGB1P1B2RPK0 211 aaPredicted RBP9.93□□□□□ -0.82
CCDC113-201ENST00000219299 B4GALT5O43286 388 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 MOCS2O96007 188 aaPredicted RBP9.93□□□□□ -0.82
CCDC113-201ENST00000219299 BCAR1P56945 870 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 PTENP60484 403 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 KRT17Q04695 432 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 CDKAL1Q5VV42 579 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 ELMOD1Q8N336 334 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 UBA3Q8TBC4 463 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 WHAMMQ8TF30 809 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 DHX38Q92620 1227 aaKnown RBP9.93□□□□□ -0.82
CCDC113-201ENST00000219299 ATP2A3Q93084 1043 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 TXLNGQ9NUQ3 528 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 SIPA1L3O60292 1781 aaPredicted RBP9.93□□□□□ -0.82
CCDC113-201ENST00000219299 OPLAHO14841 1288 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 CD52P31358 61 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 EMBQ6PCB8 327 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 TC2NQ8N9U0 490 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 SLC35C1Q96A29 364 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 MAF1Q9H063 256 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 IKZF4Q9H2S9 585 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 INTS13Q9NVM9 706 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 ABI2Q9NYB9 513 aaPredicted RBP9.93□□□□□ -0.82
CCDC113-201ENST00000219299 MORF4L1Q9UBU8 362 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 TBKBP1A7MCY6 615 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 CYB561D2O14569 222 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 HOXA2O43364 376 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 GRAP2O75791 330 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 BRD2P25440 801 aaKnown RBP9.93□□□□□ -0.82
CCDC113-201ENST00000219299 MRPS6P82932 125 aaKnown RBP9.93□□□□□ -0.82
CCDC113-201ENST00000219299 GTF2BQ00403 316 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 SP2Q02086 613 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 NME3Q13232 169 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 SLC18A3Q16572 532 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 GPAT2Q6NUI2 795 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 ACOT1Q86TX2 421 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 TMEM117Q9H0C3 514 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 SIK2Q9H0K1 926 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 DDX20Q9UHI6 824 aaKnown RBP9.93□□□□□ -0.82
CCDC113-201ENST00000219299 M0R2N6 131 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 ALDH2P05091 517 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 KRT3P12035 628 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 HYIQ5T013 277 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 BTBD8Q5XKL5 378 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 EEF1DP3Q658K8 133 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 CCT6BQ92526 530 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 TSC22D3Q99576 134 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 HEMGNQ9BXL5 484 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 RSAD1Q9HA92 442 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 ITIH6Q6UXX5 1313 aa9.93□□□□□ -0.82
CCDC113-201ENST00000219299 LACTBL1A8MY62 500 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 ZMYND10O75800 440 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 GJA5P36382 358 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 GALCP54803 685 aa9.92□□□□□ -0.82
CCDC113-201ENST00000219299 RWDD2BP57060 319 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms