RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 STK32AQ8WU08 396 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 C7orf43Q8WVR3 580 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 MRPL46Q9H2W6 279 aaKnown RBP12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 SEL1LQ9UBV2 794 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 NAALADL1Q9UQQ1 740 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 DCDC2CA8MYV0 355 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 RSPH10B2B2RC85 870 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 APOEP02649 317 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 RSPH10BP0C881 870 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 BAATQ14032 418 aaPredicted RBP12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 KPNB1Q14974 876 aaKnown RBP12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 AGR3Q8TD06 166 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 MTRQ99707 1265 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 SHCBP1LQ9BZQ2 653 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 RNPEPL1Q9HAU8 725 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 ETAA1Q9NY74 926 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 MAD2L2Q9UI95 211 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 LOC100653049A0A140TA62 436 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 KLRG2A4D1S0 409 aaPredicted RBP12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 KRT34O76011 436 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 UPP2O95045 317 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 TTC4O95801 387 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 KRT16P08779 473 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 RALAP11233 206 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 TFAMQ00059 246 aaKnown RBP12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 C3orf62Q6ZUJ4 267 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 ARID3BQ8IVW6 561 aaPredicted RBP12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 C2CD2Q9Y426 696 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 HEY1Q9Y5J3 304 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 MANSC4A6NHS7 340 aaPredicted RBP12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 DDX3XO00571 662 aaKnown RBP eCLIP12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 PEX10O60683 326 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 C6orf222P0C671 652 aaPredicted RBP12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 VCAM1P19320 739 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 HIRAP54198 1017 aaPredicted RBP12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 CDO1Q16878 200 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 GRAMD4Q6IC98 578 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 TRIM50Q86XT4 487 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 ATXN2LQ8WWM7 1075 aaKnown RBP12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 BAP1Q92560 729 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 RPS6KC1Q96S38 1066 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 FAM213AQ9BRX8 229 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 ACAD9Q9H845 621 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 SEPT9Q9UHD8 586 aaPredicted RBP12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 LRCH1Q9Y2L9 728 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 PPP2R3BQ9Y5P8 575 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 WDR46O15213 610 aaKnown RBP12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 SUPT3HO75486 399 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 ATP4AP20648 1035 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 C2CD6Q53TS8 623 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 DAB2IPQ5VWQ8 1189 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 MFSD14CQ5VZR4 134 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 LMBRD2Q68DH5 695 aaPredicted RBP12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 APTXQ7Z2E3 356 aaKnown RBP12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 PIK3R5Q8WYR1 880 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 NUDT12Q9BQG2 462 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 VPS11Q9H270 941 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 MANSC1Q9H8J5 431 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 SALL4Q9UJQ4 1053 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 PRR12Q9ULL5 1215 aa12.13□□□□□ -0.47
DNMT3B-201ENST00000201963 SYNJ2BP-COX16A0A087WUM0 186 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 CCDC85CA6NKD9 419 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 PTPN4P29074 926 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 IL17AQ16552 155 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 DNAL1Q4LDG9 190 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 PPP1R18Q6NYC8 613 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 EIF1ADQ8N9N8 165 aaKnown RBP12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 FBXL13Q8NEE6 735 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 NGRNQ9NPE2 291 aaKnown RBP12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 PFDN4Q9NQP4 134 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 COX16Q9P0S2 106 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 CTNNAL1Q9UBT7 734 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 MTO1Q9Y2Z2 717 aaKnown RBP12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 COL22A1Q8NFW1 1626 aaPredicted RBP12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 GIPC1O14908 333 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 MYL3P08590 195 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 PRELPP51888 382 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 ATXN3P54252 364 aaPredicted RBP12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 ALCAMQ13740 583 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 CNGA2Q16280 664 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 IZUMO2Q6UXV1 221 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 RBBP8NLQ8NC74 664 aaPredicted RBP12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 DAGLBQ8NCG7 672 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 DCAF4Q8WV16 495 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 NMD3Q96D46 503 aaKnown RBP12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 CHMP2BQ9UQN3 213 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 ADCY3O60266 1144 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 TNNC2P02585 160 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 TMEM259Q4ZIN3 620 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 DNAAF3Q8N9W5 541 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 TMEM35BQ8NCS4 154 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 CCNYQ8ND76 341 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 LPAR1Q92633 364 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 P2RX7Q99572 595 aaKnown RBP12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 KCNG1Q9UIX4 513 aa12.12□□□□□ -0.47
DNMT3B-201ENST00000201963 RASSF9O75901 435 aa12.11□□□□□ -0.47
DNMT3B-201ENST00000201963 KRT10P13645 584 aa12.11□□□□□ -0.47
DNMT3B-201ENST00000201963 PTPRAP18433 802 aa12.11□□□□□ -0.47
DNMT3B-201ENST00000201963 SHMT1P34896 483 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms