RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PTPRHQ9HD43 1115 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 ASIC3Q9UHC3 531 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 FEZ2Q9UHY8 353 aaPredicted RBP8.78□□□□□ -1
VAMP3-201ENST00000054666 USTQ9Y2C2 406 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 SLC45A1Q9Y2W3 748 aa8.78□□□□□ -1
VAMP3-201ENST00000054666 CCL15-CCL14A0A0B4J2E2 113 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 PDHXO00330 501 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 MED7O43513 233 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 PPFIA4O75335 1185 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 CFHP08603 1231 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 INSRRP14616 1297 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 MMP8P22894 467 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 GCLCP48506 637 aaPredicted RBP8.77□□□□□ -1.01
VAMP3-201ENST00000054666 ATP1A2P50993 1020 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 GTF2A2P52657 109 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 KRT17Q04695 432 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 POU5F1BQ06416 359 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 SLMAPQ14BN4 828 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 SIX1Q15475 284 aaPredicted RBP8.77□□□□□ -1.01
VAMP3-201ENST00000054666 CCL15Q16663 113 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 KYAT1Q16773 422 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 ZNF792Q3KQV3 632 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 ZNF394Q53GI3 561 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 AGBL2Q5U5Z8 902 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 EEF1DP3Q658K8 133 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 LLGL2Q6P1M3 1020 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 DCUN1D2Q6PH85 259 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 LRRC31Q6UY01 552 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 CROCCP2Q86T23 111 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 KATNAL2Q8IYT4 538 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 OR2W6PQ8NHA6 318 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 SLCO2A1Q92959 643 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 DDX27Q96GQ7 796 aaKnown RBP8.77□□□□□ -1.01
VAMP3-201ENST00000054666 RBM41Q96IZ5 413 aaKnown RBP8.77□□□□□ -1.01
VAMP3-201ENST00000054666 STRIP2Q9ULQ0 834 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 CLEC11AQ9Y240 323 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 GLTPD2A6NH11 291 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 H0YGN5 161 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 STRNO43815 780 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 MCF2P10911 925 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 P4HA1P13674 534 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 CD19P15391 556 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 POLR2BP30876 1174 aaKnown RBP8.77□□□□□ -1.01
VAMP3-201ENST00000054666 HPDP32754 393 aaPredicted RBP8.77□□□□□ -1.01
VAMP3-201ENST00000054666 ASPAP45381 313 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 IRAK1P51617 712 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 FAM187BQ17R55 369 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 ZDHHC24Q6UX98 284 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 ZNF467Q7Z7K2 595 aaPredicted RBP8.77□□□□□ -1.01
VAMP3-201ENST00000054666 CDR2LQ86X02 465 aaPredicted RBP8.77□□□□□ -1.01
VAMP3-201ENST00000054666 ZDHHC14Q8IZN3 488 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 CEP120Q8N960 986 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 EXD1Q8NHP7 514 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 C1orf54Q8WWF1 131 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 EVPLQ92817 2033 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 PABPC3Q9H361 631 aaKnown RBP8.77□□□□□ -1.01
VAMP3-201ENST00000054666 RNPEPQ9H4A4 650 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.77□□□□□ -1.01
VAMP3-201ENST00000054666 GRHL1Q9NZI5 618 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 BCCIPQ9P287 314 aaKnown RBP eCLIP8.77□□□□□ -1.01
VAMP3-201ENST00000054666 NXF1Q9UBU9 619 aaKnown RBP8.77□□□□□ -1.01
VAMP3-201ENST00000054666 PCDHGC3Q9UN70 934 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 NFS1Q9Y697 457 aa8.77□□□□□ -1.01
VAMP3-201ENST00000054666 A0A087WZ62 844 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 NUDT17P0C025 328 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 WEE2P0C1S8 567 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 ZNF286BP0CG31 522 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 RALAP11233 206 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 EIF4BP23588 611 aaKnown RBP8.76□□□□□ -1.01
VAMP3-201ENST00000054666 KCNJ1P48048 391 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 PDCLQ13371 301 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 SNX1Q13596 522 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 LLGL1Q15334 1064 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 KCTD19Q17RG1 926 aaPredicted RBP8.76□□□□□ -1.01
VAMP3-201ENST00000054666 GJC2Q5T442 439 aaPredicted RBP8.76□□□□□ -1.01
VAMP3-201ENST00000054666 DPP9Q86TI2 863 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 ERICH1Q86X53 443 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 IFNLR1Q8IU57 520 aaPredicted RBP8.76□□□□□ -1.01
VAMP3-201ENST00000054666 AFG1LQ8WV93 481 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 NLRP7Q8WX94 980 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 EMID1Q96A84 441 aaPredicted RBP8.76□□□□□ -1.01
VAMP3-201ENST00000054666 FAXDC2Q96IV6 333 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 MCEEQ96PE7 176 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 PPP1R16BQ96T49 567 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 FDXACB1Q9BRP7 624 aaPredicted RBP8.76□□□□□ -1.01
VAMP3-201ENST00000054666 ADPGKQ9BRR6 497 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 TXLNGYQ9BZA5 131 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 TSPYL1Q9H0U9 437 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 XYLT2Q9H1B5 865 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 MINDY3Q9H8M7 445 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 ANK1P16157 1881 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 GRIN2DO15399 1336 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 BTBD19C9JJ37 291 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 KRT1P04264 644 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 NFICP08651 508 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 STAG3L1P0CL83 205 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 ATF2P15336 505 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 CDH5P33151 784 aaPredicted RBP8.76□□□□□ -1.01
VAMP3-201ENST00000054666 ADCYAP1R1P41586 468 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 PTK6Q13882 451 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms