RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 UBQLN1Q9UMX0 589 aaKnown RBP23.57■■□□□ 1.36
HOXC8-201ENST00000040584 GIT1Q9Y2X7 761 aa23.57■■□□□ 1.36
HOXC8-201ENST00000040584 JRKLQ9Y4A0 524 aa23.57■■□□□ 1.36
HOXC8-201ENST00000040584 BZW2Q9Y6E2 419 aaKnown RBP23.57■■□□□ 1.36
HOXC8-201ENST00000040584 C9IYK1 514 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 SKIP12755 728 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 FERP16591 822 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 USP8P40818 1118 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 RBP5P82980 135 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 CUL2Q13617 745 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 TDRD12Q587J7 1177 aaKnown RBP23.56■■□□□ 1.36
HOXC8-201ENST00000040584 SLC24A5Q71RS6 500 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 ENOSF1Q7L5Y1 443 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 SEPT8Q92599 483 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 FAM81BQ96LP2 452 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 TRIM10Q9UDY6 481 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 SCN5AQ14524 2016 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 ARL5CA6NH57 179 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 EVI5O60447 810 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 RHOXF2BP0C7M4 288 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 TCTN1Q2MV58 587 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 CCDC70Q6NSX1 233 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 PGBD4Q96DM1 585 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 TSPAN18Q96SJ8 248 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 RHOXF2Q9BQY4 288 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 TSPYL2Q9H2G4 693 aaPredicted RBP23.56■■□□□ 1.36
HOXC8-201ENST00000040584 ABCB6Q9NP58 842 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 MIOSQ9NXC5 875 aa23.56■■□□□ 1.36
HOXC8-201ENST00000040584 TET1Q8NFU7 2136 aa23.55■■□□□ 1.36
HOXC8-201ENST00000040584 PDCD11Q14690 1871 aaKnown RBP23.55■■□□□ 1.36
HOXC8-201ENST00000040584 ATP1A1P05023 1023 aaKnown RBP23.55■■□□□ 1.36
HOXC8-201ENST00000040584 PTK2Q05397 1052 aa23.55■■□□□ 1.36
HOXC8-201ENST00000040584 SOX4Q06945 474 aaPredicted RBP23.55■■□□□ 1.36
HOXC8-201ENST00000040584 DEFB128Q7Z7B8 93 aa23.55■■□□□ 1.36
HOXC8-201ENST00000040584 ZNF598Q86UK7 904 aaKnown RBP23.55■■□□□ 1.36
HOXC8-201ENST00000040584 FAM71AQ8IYT1 594 aa23.55■■□□□ 1.36
HOXC8-201ENST00000040584 RUBCNQ92622 972 aa23.55■■□□□ 1.36
HOXC8-201ENST00000040584 HPDLQ96IR7 371 aa23.55■■□□□ 1.36
HOXC8-201ENST00000040584 DEF6Q9H4E7 631 aa23.55■■□□□ 1.36
HOXC8-201ENST00000040584 RSAD1Q9HA92 442 aa23.55■■□□□ 1.36
HOXC8-201ENST00000040584 GOLGA2P5Q9HBQ8 144 aa23.55■■□□□ 1.36
HOXC8-201ENST00000040584 PSD3Q9NYI0 1048 aa23.55■■□□□ 1.36
HOXC8-201ENST00000040584 NXF1Q9UBU9 619 aaKnown RBP23.55■■□□□ 1.36
HOXC8-201ENST00000040584 PCDHA13Q9Y5I0 950 aa23.55■■□□□ 1.36
HOXC8-201ENST00000040584 PPEF2O14830 753 aa23.54■■□□□ 1.36
HOXC8-201ENST00000040584 KIF11P52732 1056 aa23.54■■□□□ 1.36
HOXC8-201ENST00000040584 ITIH3Q06033 890 aa23.54■■□□□ 1.36
HOXC8-201ENST00000040584 WDR72Q3MJ13 1102 aa23.54■■□□□ 1.36
HOXC8-201ENST00000040584 TAF4BQ92750 862 aa23.54■■□□□ 1.36
HOXC8-201ENST00000040584 PPP1R10Q96QC0 940 aaKnown RBP23.54■■□□□ 1.36
HOXC8-201ENST00000040584 RPS6KC1Q96S38 1066 aa23.54■■□□□ 1.36
HOXC8-201ENST00000040584 NIF3L1Q9GZT8 377 aa23.54■■□□□ 1.36
HOXC8-201ENST00000040584 VIPAS39Q9H9C1 493 aa23.54■■□□□ 1.36
HOXC8-201ENST00000040584 LUC7LQ9NQ29 371 aaKnown RBP23.54■■□□□ 1.36
HOXC8-201ENST00000040584 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.54■■□□□ 1.36
HOXC8-201ENST00000040584 POLIQ9UNA4 740 aa23.54■■□□□ 1.36
HOXC8-201ENST00000040584 TANC1Q9C0D5 1861 aa23.54■■□□□ 1.36
HOXC8-201ENST00000040584 POLR3GO15318 223 aaPredicted RBP23.53■■□□□ 1.36
HOXC8-201ENST00000040584 CXCL10P02778 98 aa23.53■■□□□ 1.36
HOXC8-201ENST00000040584 TBXAS1P24557 533 aaPredicted RBP23.53■■□□□ 1.36
HOXC8-201ENST00000040584 ATICP31939 592 aa23.53■■□□□ 1.36
HOXC8-201ENST00000040584 FAM189BP81408 668 aa23.53■■□□□ 1.36
HOXC8-201ENST00000040584 C9orf57Q5W0N0 161 aa23.53■■□□□ 1.36
HOXC8-201ENST00000040584 LACRTQ9GZZ8 138 aa23.53■■□□□ 1.36
HOXC8-201ENST00000040584 PRDM5Q9NQX1 630 aaPredicted RBP23.53■■□□□ 1.36
HOXC8-201ENST00000040584 ENPP3O14638 875 aa23.53■■□□□ 1.36
HOXC8-201ENST00000040584 XPOTO43592 962 aaKnown RBP23.53■■□□□ 1.36
HOXC8-201ENST00000040584 PARNO95453 639 aaKnown RBP23.53■■□□□ 1.36
HOXC8-201ENST00000040584 CCDC172P0C7W6 258 aa23.53■■□□□ 1.36
HOXC8-201ENST00000040584 SCNN1GP51170 649 aa23.53■■□□□ 1.36
HOXC8-201ENST00000040584 VSNL1P62760 191 aa23.53■■□□□ 1.36
HOXC8-201ENST00000040584 ZNF667Q5HYK9 610 aa23.53■■□□□ 1.36
HOXC8-201ENST00000040584 SCARA5Q6ZMJ2 495 aa23.53■■□□□ 1.36
HOXC8-201ENST00000040584 ZNF571Q7Z3V5 609 aaPredicted RBP23.53■■□□□ 1.36
HOXC8-201ENST00000040584 ALS2CR12Q96Q35 445 aa23.53■■□□□ 1.36
HOXC8-201ENST00000040584 ZNF263O14978 683 aa23.52■■□□□ 1.36
HOXC8-201ENST00000040584 PJA2O43164 708 aa23.52■■□□□ 1.36
HOXC8-201ENST00000040584 CYP26A1O43174 497 aa23.52■■□□□ 1.36
HOXC8-201ENST00000040584 AKR1B10O60218 316 aa23.52■■□□□ 1.36
HOXC8-201ENST00000040584 THP07101 528 aa23.52■■□□□ 1.36
HOXC8-201ENST00000040584 KRT5P13647 590 aa23.52■■□□□ 1.36
HOXC8-201ENST00000040584 ACO1P21399 889 aaKnown RBP23.52■■□□□ 1.36
HOXC8-201ENST00000040584 ASPAP45381 313 aa23.52■■□□□ 1.36
HOXC8-201ENST00000040584 UBE2Q1Q7Z7E8 422 aa23.52■■□□□ 1.36
HOXC8-201ENST00000040584 RNF10Q8N5U6 811 aaKnown RBP23.52■■□□□ 1.36
HOXC8-201ENST00000040584 APBB2Q92870 758 aa23.52■■□□□ 1.36
HOXC8-201ENST00000040584 EXOC4Q96A65 974 aa23.52■■□□□ 1.36
HOXC8-201ENST00000040584 VRTNQ9H8Y1 702 aa23.52■■□□□ 1.36
HOXC8-201ENST00000040584 UBN1Q9NPG3 1134 aa23.52■■□□□ 1.36
HOXC8-201ENST00000040584 TRIM43BA6NCK2 446 aa23.51■■□□□ 1.35
HOXC8-201ENST00000040584 ENC1O14682 589 aa23.51■■□□□ 1.35
HOXC8-201ENST00000040584 EOMESO95936 686 aa23.51■■□□□ 1.35
HOXC8-201ENST00000040584 WEE2P0C1S8 567 aa23.51■■□□□ 1.35
HOXC8-201ENST00000040584 CYP3A5P20815 502 aa23.51■■□□□ 1.35
HOXC8-201ENST00000040584 ITGB8P26012 769 aa23.51■■□□□ 1.35
HOXC8-201ENST00000040584 NOA1Q8NC60 698 aaKnown RBP23.51■■□□□ 1.35
HOXC8-201ENST00000040584 TRIM43Q96BQ3 446 aaPredicted RBP23.51■■□□□ 1.35
HOXC8-201ENST00000040584 SYT11Q9BT88 431 aa23.51■■□□□ 1.35
HOXC8-201ENST00000040584 ACP6Q9NPH0 428 aa23.51■■□□□ 1.35
HOXC8-201ENST00000040584 PCDH10Q9P2E7 1040 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms