RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Zbtb14Q08376 449 aa18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Gm5168Q4KL04 211 aa18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Stxbp2Q64324 593 aa18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Slitrk1Q810C1 696 aa18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Dupd1Q8BK84 215 aa18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Znf76Q8BMU0 568 aa18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Tmco6Q8BQX5 494 aa18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Slc39a13Q8BZH0 361 aa18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Plekhh3Q8VCE9 796 aa18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 St13Q99L47 371 aaKnown RBP18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 AticQ9CWJ9 592 aaKnown RBP18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 1700016D06RikQ9DAA5 166 aa18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Olig1Q9JKN5 260 aa18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 XkQ9QXY7 446 aa18.36■□□□□ 0.53
Ckap4-202ENSMUST00000167671 AspgA0JNU3 564 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Gm10436L7N1Y3 520 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Tarbp2P97473 365 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Runx2Q08775 607 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Ifnl2Q4VK74 193 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Stip1Q60864 543 aaKnown RBP18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Ptdss1Q99LH2 473 aaKnown RBP18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Cetn2Q9R1K9 172 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Hoxc13P50207 328 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Npr3P70180 536 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Nsun6Q7TS68 476 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Vps37bQ8R0J7 285 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 NelfcdQ922L6 591 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Arhgef25Q9CWR0 618 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Ankef1Q9D2J7 775 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Cst12Q9DAN8 128 aa18.35■□□□□ 0.53
Ckap4-202ENSMUST00000167671 2210011C24RikA0A087WQ89 206 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Fgf15O35622 218 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Ptp4a2O70274 167 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Epas1P97481 874 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Fdxacb1Q3UY23 622 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Grm6Q5NCH9 871 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Soat1Q61263 540 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 AmphQ7TQF7 686 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Pak4Q8BTW9 593 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Smtnl2Q8CI12 456 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Tnpo2Q99LG2 887 aaKnown RBP18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Mphosph6Q9D1Q1 161 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Dusp8O09112 663 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Rab20P35295 233 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 GsapQ3TCV3 858 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Nt5dc3Q3UHB1 546 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Fam198bQ3UPI1 517 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Fam8a1Q3URQ4 399 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Syce2Q505B8 171 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Spa17Q62252 149 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Cdc14aQ6GQT0 603 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Rcn2Q8BP92 320 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Tmem206Q9D771 350 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Tmem68Q9D850 329 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Subh2bvQ9D9Z7 123 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Abcb11Q9QY30 1321 aa18.34■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Arhgap42B2RQE8 841 aa18.33■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Mmp13P33435 472 aa18.33■□□□□ 0.53
Ckap4-202ENSMUST00000167671 PklrP53657 574 aa18.33■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Pdlim7Q3TJD7 457 aa18.33■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Capn13Q3UW68 665 aa18.33■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Snx19Q6P4T1 997 aa18.33■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Stxbp5Q8K400 1152 aaKnown RBP18.33■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Wrap53Q8VC51 532 aa18.33■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Rin1Q921Q7 763 aa18.33■□□□□ 0.53
Ckap4-202ENSMUST00000167671 Prss51A0A286YDY8 319 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 IqccA2ADZ8 418 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Cyb5rlB1AS42 316 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Nub1P54729 614 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Foxp2P58463 714 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Plk1Q07832 603 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Camta2Q80Y50 1208 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Q80ZQ3 298 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Osbpl2Q8BX94 484 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Acot11Q8VHQ9 594 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Polr3fQ921X6 316 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 GrapQ9CX99 217 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Mxra7Q9CZH7 178 aa18.33■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Cd70O55237 195 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Yy1Q00899 414 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Hbs1lQ69ZS7 682 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Mettl16Q9CQG2 553 aaKnown RBP18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Dusp21Q9D9D8 189 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 1700013H16RikQ9DAC5 291 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Rnf14Q9JI90 485 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Gabbr1Q9WV18 960 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Gcnt4E9Q649 455 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 FerP70451 823 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Trim72Q1XH17 477 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Shroom1Q5SX79 823 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Grb10Q60760 621 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 MregQ6NVG5 214 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Glra2Q7TNC8 452 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Nipa1Q8BHK1 323 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Ago2Q8CJG0 860 aaKnown RBP18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Thap12Q9CUX1 758 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Cables1Q9ESJ1 568 aa18.32■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Itgb4A2A863 1818 aa18.31■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Mocs3A2BDX3 460 aaKnown RBP18.31■□□□□ 0.52
Ckap4-202ENSMUST00000167671 Ppp1r36D3Z0R2 411 aa18.31■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms