RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Agap1Q8BXK8 857 aaKnown RBP13.16□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Polr2bQ8CFI7 1174 aaKnown RBP13.16□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Timd2Q8R183 305 aa13.16□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 NeproQ8R2U2 564 aa13.16□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Psmd6Q99JI4 389 aa13.16□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Tulp1Q9Z273 543 aa13.16□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Top3bQ9Z321 862 aaKnown RBP13.16□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Ptpn3A2ALK8 913 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Gprin2D3Z1D7 455 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Ugt1a8D3Z748 530 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Dcpp2E9PYC2 171 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Dcpp1L7N1X9 171 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 AfmO89020 608 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Kcnj2P35561 428 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Man1a2P39098 641 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Mcm5P49718 733 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Btg3P50615 252 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Nek1P51954 1203 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Tmprss15P97435 1069 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Rapgef1Q3UHC1 1224 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Foxn3Q499D0 457 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Grik1Q60934 836 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Ttyh3Q6P5F7 524 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Dnajc16Q80TN4 772 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Znf598Q80YR4 908 aaKnown RBP13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 B130006D01RikQ8BRH6 153 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Igsf8Q8R366 611 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Ubox5Q925F4 539 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 DlstQ9D2G2 454 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Atad1Q9D5T0 361 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 PirQ9D711 290 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Erap1Q9EQH2 930 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Add1Q9QYC0 735 aaKnown RBP13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Large1Q9Z1M7 756 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 Col27a1Q5QNQ9 1845 aa13.15□□□□□ -0.3
Ccdc28b-202ENSMUST00000106035 MgamB5THE2 1827 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Gm10718D3Z1I7 227 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Cyp8b1O88962 500 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tnnc2P20801 160 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Gdf7P43029 461 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Wbp1P97764 304 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 VcpQ01853 806 aaKnown RBP13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Kcnb1Q03717 857 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Sox8Q04886 464 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ssrp1Q08943 708 aaKnown RBP13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Gas2l3Q3UWW6 683 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Zfp791Q497V9 528 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ltbp3Q61810 1268 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 MyorgQ69ZQ1 716 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 R3hdm2Q80TM6 1044 aaKnown RBP13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Pcsk9Q80W65 694 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Slfn5Q8CBA2 884 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Cog3Q8CI04 820 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Zbtb6Q8K088 423 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Asb2Q8K0L0 634 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 HyiQ8R1F5 277 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 RabepkQ8VCH5 380 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Zfp566Q8VCI1 386 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Socs4Q91ZA6 436 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ophn1Q99J31 802 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Smg9Q9DB90 520 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tacc2Q9JJG0 1149 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tlr2Q9QUN7 784 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Bnip3lQ9Z2F7 218 aa13.14□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 F8Q06194 2319 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Cdc27A2A6Q5 825 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Skint6A7XUZ6 1240 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Nolc1E9Q5C9 702 aaKnown RBP13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Pate1E9Q658 125 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 TyrP11344 533 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Gnl1P36916 607 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Flt3lgP49772 232 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Cct6aP80317 531 aaKnown RBP13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Slc7a1Q09143 622 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Acot10Q32MW3 439 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Wdr93Q402B2 695 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Cep135Q6P5D4 1140 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Txndc16Q7TN22 820 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Spata20Q80YT5 790 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Cep128Q8BI22 1102 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 FsbpQ8BKE5 299 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Shc2Q8BMC3 573 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ldhal6bQ8BVP2 382 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Rec8Q8C5S7 591 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Atat1Q8K341 421 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ap3m2Q8R2R9 418 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Pde2aQ922S4 916 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tom1l1Q923U0 474 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Sdr42e1Q9D665 394 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tlr5Q9JLF7 859 aa13.13□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Ttll10A4Q9F3 704 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Znf568E9PYI1 671 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Speer4f2E9Q366 295 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Odc1P00860 461 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Abcb4P21440 1276 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 TxkP42682 527 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Zhx1P70121 873 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Serac1Q3U213 654 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Fnip1Q68FD7 1165 aa13.12□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Tbc1d12Q6A039 696 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms