RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 B020004J07RikQ3UTC0 476 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Fam183bQ5NC57 135 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Tatdn1Q6P8M1 295 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Ints8Q80V86 995 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Zbtb24Q80X44 710 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Spata20Q80YT5 790 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Agap1Q8BXK8 857 aaKnown RBP13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Lin9Q8C735 542 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Igsf8Q8R366 611 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Olfr385Q8VGT1 312 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Sfxn1Q99JR1 322 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Kif17Q99PW8 1038 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Gstt4Q9D4P7 240 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 PgcQ9D7R7 392 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 NckipsdQ9ESJ4 714 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Dusp10Q9ESS0 483 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Cog8Q9JJA2 640 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Gfra4Q9JJT2 260 aa13.05□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 F8Q06194 2319 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Ttc38A3KMP2 465 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Wdr72D3YYM4 1114 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Usp35M0QWN7 1009 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Cyp2b9P12790 491 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Tnnc2P20801 160 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Gna14P30677 355 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Nr2f2P43135 414 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Rpl13P47963 211 aaKnown RBP13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Atp13a4Q5XF90 1193 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Adck2Q6NSR3 617 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Dhx37Q6NZL1 1150 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Zfp251Q6PCX8 632 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Luc7l2Q7TNC4 392 aaKnown RBP13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Olfr1105Q7TR58 312 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Polr2eQ80UW8 210 aaKnown RBP13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 B3glctQ8BHT6 489 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Zbtb49Q8BXX2 756 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Slfn5Q8CBA2 884 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Ccdc73Q8CDM4 1066 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Gas2l1Q8JZP9 678 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Hnrnpul1Q8VDM6 859 aaKnown RBP13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Pcdhb15Q91Y04 786 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Tubgcp2Q921G8 905 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Ppp1r3aQ99MR9 1089 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Dpysl5Q9EQF6 564 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Ddx25Q9QY15 484 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Adamts5Q9R001 930 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 DexiQ9WUQ7 95 aa13.04□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Ankrd34aB2RW11 495 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Tgfbr3lD3YZZ2 297 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Vmn2r115E9Q0E7 857 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Pcsk6F6XJP7 959 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Gnl1P36916 607 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Sdc2P43407 202 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Shmt1P50431 478 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Rrp1P56183 494 aaKnown RBP13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 PtgdrP70263 357 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Sox8Q04886 464 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Zc3h18Q0P678 948 aaKnown RBP13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Cyp2c65Q148B1 490 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Fubp3Q3TIX6 575 aaKnown RBP13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Cyp2c66Q5GLZ0 490 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Dlg4Q62108 724 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Pla2g4cQ64GA5 597 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Gucy2gQ6TL19 1100 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Tmc8Q7TN58 722 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Zscan4cQ80VJ6 506 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Rspry1Q8BVR6 576 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Slc9a9Q8BZ00 644 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Spice1Q8C804 860 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Tmem132aQ922P8 1018 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Lpin2Q99PI5 893 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 SdhbQ9CQA3 282 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Trmt10bQ9D075 318 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Erap1Q9EQH2 930 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Sv2aQ9JIS5 742 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Rilpl1Q9JJC6 406 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Rnf25Q9QZR0 456 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Col27a1Q5QNQ9 1845 aa13.03□□□□□ -0.32
Ccdc28a-202ENSMUST00000080860 Abcb5B5X0E4 1255 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Speer4f2E9Q366 295 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Sema4dO09126 861 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 BhmtO35490 407 aaKnown RBP13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 P01652 108 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Prl2c2P04095 224 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Ass1P16460 412 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Tnnt2P50752 301 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Spire1Q52KF3 598 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Rnf43Q5NCP0 784 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Hsf5Q5ND04 624 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Ttyh3Q6P5F7 524 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Kdm1aQ6ZQ88 853 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Nipal1Q8BMW7 416 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Tmem209Q8BRG8 561 aaKnown RBP13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Ldhal6bQ8BVP2 382 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Def6Q8C2K1 630 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Fbxl13Q8CDU4 790 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Tmem134Q8R0J4 195 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Card14Q99KF0 999 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 Galnt15Q9D2N8 638 aa13.02□□□□□ -0.33
Ccdc28a-202ENSMUST00000080860 March8Q9DBD2 286 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms