RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Cys1Q8R4T1 145 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Pcdha2Q91Y17 948 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rasgef1cQ9D300 466 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Cep72Q9D3R3 646 aa12.01□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Zgrf1Q0VGT4 1863 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Zscan4-ps3A0A1B0GRH6 506 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Zscan4-ps2A0A1C7CYU6 506 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rabgap1A2AWA9 1064 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Mmrn2A6H6E2 943 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Epha3P29319 983 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Serpina1eQ00898 413 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 HelqQ2VPA6 1069 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Hexim2Q3TVI4 313 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 E330034G19RikQ3UWX6 351 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 PnocQ64387 187 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Osbpl2Q8BX94 484 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Lrrc45Q8CIM1 670 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 PhykplQ8R1K4 467 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ero1bQ8R2E9 467 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Zmat2Q9CPW7 199 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 1700129C05RikQ9CQ77 218 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Med10Q9CXU0 135 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Limd1Q9QXD8 668 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Arih1Q9Z1K5 555 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Osbpl9A2A8Z1 736 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Zfp780bE9Q2S6 806 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Zfy1P10925 782 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Cdc25cP48967 447 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Hspa8P63017 646 aaKnown RBP12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 B3gnt4Q1RLK6 350 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 InipQ3TXT3 104 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Hsph1Q61699 858 aaKnown RBP12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Sema5aQ62217 1077 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Nudt16Q6P3D0 195 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Dzip3Q7TPV2 1204 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Mfn1Q811U4 741 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Zdhhc15Q8BGJ0 337 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Dars2Q8BIP0 653 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ddx47Q9CWX9 455 aaKnown RBP12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Mrpl2Q9D773 306 aaKnown RBP12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Stx12Q9ER00 274 aa12□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Brca1P48754 1812 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 FlgP11088 336 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Acsbg2Q2XU92 667 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Srebf2Q3U1N2 1130 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rmdn3Q3UJU9 470 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Foxd4Q60688 444 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Zbtb17Q60821 794 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Dsg1aQ61495 1057 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Gpr156Q6PCP7 798 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 SpopQ6ZWS8 374 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Mtmr12Q80TA6 747 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Pja2Q80U04 707 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Fermt3Q8K1B8 665 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Mettl13Q91YR5 698 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ubxn2aQ99KJ0 258 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tlr3Q99MB1 905 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Mrpl1Q99N96 336 aaKnown RBP11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Bcs1lQ9CZP5 418 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Adgrf4Q9D2L6 698 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Atp5dQ9D3D9 168 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Stk32bQ9JJX8 414 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Plod3Q9R0E1 741 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Grk1Q9WVL4 564 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Pmm2Q9Z2M7 242 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Prdm12A2AJ77 365 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Gm4846B2RWH8 538 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Clk4O35493 481 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 M6prP24668 278 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 RenbpP82343 430 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Kcnj13P86046 360 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Lrrc14bQ3UJB3 510 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ctc1Q5SUQ9 1212 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 HarsQ61035 509 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Pde1cQ64338 706 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Skiv2lQ6NZR5 1244 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Utp15Q8C7V3 528 aaKnown RBP11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Usp27Q8CEG8 438 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Tspan8Q8R3G9 235 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ppp1r16bQ8VHQ3 568 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 StambpQ9CQ26 424 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Cnot8Q9D8X5 292 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 IdeQ9JHR7 1019 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Pcdh15Q99PJ1 1943 aa11.99□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ccdc24E9PUW8 296 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Clk2O35491 499 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Cct5P80316 541 aaKnown RBP11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Dab2ipQ3UHC7 1189 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Gngt1Q61012 74 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 EsrrbQ61539 433 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Acot5Q6Q2Z6 421 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ip6k2Q80V72 448 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Slc39a13Q8BZH0 361 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Syne4Q8CII8 388 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Scrn2Q8VCA8 425 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Vwa5aQ99KC8 793 aaKnown RBP11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Ndc80Q9D0F1 642 aaKnown RBP11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 PlekQ9JHK5 350 aaKnown RBP11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Fut8Q9WTS2 575 aa11.98□□□□□ -0.49
Ddx55-201ENSMUST00000071057 Rasgrp1Q9Z1S3 795 aa11.98□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms