RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Fcho1Q8K285 873 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 McamQ8R2Y2 648 aaKnown RBP12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Hars2Q99KK9 505 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Ddx21Q9JIK5 851 aaKnown RBP12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 CrnnD3YUU6 520 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Tcp10bE9PYJ0 438 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Egfl8Q6GUQ1 293 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Far2Q7TNT2 515 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 SucoQ8C341 1250 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Eya4Q9Z191 616 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 CblP22682 913 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Stxbp2Q64324 593 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Slf1Q8R3P9 1054 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Usp31E9Q6Y8 1344 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Chil3O35744 398 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 UmpsP13439 481 aaKnown RBP12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 ItchQ8C863 864 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Pkp3Q9QY23 797 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Myh15E9Q264 1925 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 ZfrO88532 1074 aaKnown RBP12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Slc2a4P14142 509 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 RxrgP28705 463 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Cct8P42932 548 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Cyp2e1Q05421 493 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Znf746Q3U133 652 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 CcnjlQ5SRT8 387 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Stip1Q60864 543 aaKnown RBP12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Lilrb4Q64281 335 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 WlsQ6DID7 541 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Ccdc63Q8CDV6 558 aa12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Ilf2Q9CXY6 390 aaKnown RBP12.95□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Gm13084A2A8N0 494 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Dsg3O35902 993 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Pgk2P09041 417 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Krt76Q3UV17 594 aaKnown RBP12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Oca2Q62052 833 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 YwhabQ9CQV8 246 aaKnown RBP12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Neu2Q9JMH3 379 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Vti1bO88384 232 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Arhgap45Q3TBD2 1116 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Tcf12Q61286 706 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Ttc7aQ8BGB2 858 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Pak5Q8C015 719 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 DpydQ8CHR6 1025 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Psrc1Q9D0P7 329 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Ccnd1P25322 295 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Clec4fP70194 548 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 StamP70297 548 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Gsdmc2Q2KHK6 480 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Acot5Q6Q2Z6 421 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Trim9Q8C7M3 817 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Mmgt1Q8K273 131 aaKnown RBP12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 MyripQ8K3I4 856 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 B3galt6Q91Z92 325 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 MeiocA2AG06 965 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Gm8298J3QPI0 401 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Gm3264L7N2C5 238 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 MafgO54790 162 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Samd11Q1RNF8 542 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Tatdn3Q3U1C6 294 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Garnl3Q3V0G7 1038 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Vmn2r43Q80Z08 845 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 TwnkQ8CIW5 685 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Fam192aQ91WE2 254 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Alg1Q921Q3 482 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Tmem47Q9JJG6 181 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Acnat1A2AKK5 416 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Ptprn2P80560 1001 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Olfr1494Q8VGP8 315 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Kif1aP33173 1695 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Grin2dQ03391 1323 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 R3hdm1E9Q9Q2 1135 aaKnown RBP12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 AgtP11859 477 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Ogfod1Q3U0K8 545 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Tmc4Q7TQ65 694 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Mtrf1Q8K126 446 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Bbs2Q9CWF6 721 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Actl7aQ9QY84 440 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 SprtnG3X912 497 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 PbsnO08976 174 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 CstaP56567 97 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Ankrd27Q3UMR0 1048 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Nqo1Q64669 274 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Tc2nQ91XT6 489 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Tm9sf1Q9DBU0 606 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Uhrf1bp1B2KF50 1429 aa12.94□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Ppp6r2Q8R3Q2 923 aa12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Cdh18E9Q9Q6 790 aa12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Pou4f1P17208 421 aa12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Crabp2P22935 138 aa12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Hnrnph2P70333 449 aaKnown RBP12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Nckap1lQ8K1X4 1134 aa12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Hspa1bP17879 642 aaKnown RBP12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Atp5bP56480 529 aaKnown RBP12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Rbm46P86049 533 aa12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Ttbk2Q3UVR3 1243 aa12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Ppp1r13lQ5I1X5 824 aa12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Nlrp9cQ66X01 1004 aa12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Usp38Q8BW70 1042 aa12.93□□□□□ -0.34
Vcpip1-201ENSMUST00000057438 Rhpn2Q8BWR8 686 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms