RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 N4bp3Q8C7U1 537 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Dclre1bQ8C7W7 541 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Calhm6Q8C9E8 313 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Lin7aQ8JZS0 233 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 MyocdQ8VIM5 935 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Spns2Q91VM4 549 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 1700129C05RikQ9CQ77 218 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Grtp1Q9D3N8 359 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Tex9Q9D845 387 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Map3k20Q9ESL4 802 aaKnown RBP7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Igf2rQ07113 2483 aaKnown RBP7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Card9A2AIV8 536 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Bpifb9bA2AJD1 591 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Wdr95D3Z7A8 784 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Gm8909G3UXE9 396 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 NumblO08919 604 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Sar1aP36536 198 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Rfx2P48379 717 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Atoh1P48985 351 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Nrp1P97333 923 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Igsf9Q05BQ1 1179 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Rnf113a2Q14B01 337 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Wdr41Q3UDP0 460 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Capn13Q3UW68 665 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Trappc3lQ4KL14 181 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 SpdyaQ5IBH7 310 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Vav2Q60992 868 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Sez6lQ6P1D5 963 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 NostrinQ6WKZ7 506 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 SpopQ6ZWS8 374 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Supt20hQ7TT00 530 aaKnown RBP7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Rhbdf2Q80WQ6 827 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Bpifb9aQ80XI7 591 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Tdp1Q8BJ37 609 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 C130026I21RikQ8C898 291 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Rab44Q8CB87 725 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Fbxl13Q8CDU4 790 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Sugp1Q8CH02 643 aaKnown RBP7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Il31raQ8K5B1 716 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Uroc1Q8VC12 676 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Mfsd5Q921Y4 450 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Tnpo2Q99LG2 887 aaKnown RBP7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Asb11Q9CQ31 323 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Emc2Q9CRD2 297 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Elp3Q9CZX0 547 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Lman1Q9D0F3 517 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 1700016D06RikQ9DAA5 166 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Hic1Q9R1Y5 733 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Gabbr1Q9WV18 960 aa7.58□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Plcg1Q62077 1302 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Znf804aA2AKY4 1200 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Trove2O08848 538 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Art2bO35975 289 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Pgk2P09041 417 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Xrcc5P27641 732 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Hoxc13P50207 328 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Gtf2bP62915 316 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Calb2Q08331 271 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 4930502E18RikQ14BQ3 236 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Cfap52Q5F201 620 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Ntrk3Q6VNS1 825 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Moxd2Q7TT41 619 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Ddhd1Q80YA3 547 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Ldlrap1Q8C142 308 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Tmem161bQ8C2L6 487 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Fbxl5Q8C2S5 690 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Apol9bQ8C7I4 310 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Rell1Q8K2J7 272 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Znf830Q8R1N0 363 aaKnown RBP7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Apol9aQ8VDU3 310 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Ankrd49Q8VE42 238 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Ptdss1Q99LH2 473 aaKnown RBP7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Sppl3Q9CUS9 384 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Rnf225Q9D7D1 332 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Wdr83Q9DAJ4 315 aaKnown RBP7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Rsrc1Q9DBU6 334 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Abcb11Q9QY30 1321 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Celf5D3Z4T1 395 aaKnown RBP7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Gm4841E9QAA8 417 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Calb1P12658 261 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Pik3caP42337 1068 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Igfbp4P47879 254 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Tbc1d10aP58802 500 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 RalgdsQ03385 852 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Wdr18Q4VBE8 431 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Syce2Q505B8 171 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Grm6Q5NCH9 871 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Klra6Q60653 266 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Q6DFW0 481 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Ubap2lQ80X50 1107 aaKnown RBP7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Slc17a8Q8BFU8 601 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Tmem117Q8BH18 514 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Znf467Q8JZL0 594 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 DmgdhQ9DBT9 869 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 PnkpQ9JLV6 522 aaKnown RBP7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Mtmr1Q9Z2C4 669 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Btbd19S4R1I0 287 aa7.57□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Ccdc170D3YXL0 722 aa7.56□□□□□ -1.2
Clrn1-202ENSMUST00000055636 GclmO09172 274 aaKnown RBP7.56□□□□□ -1.2
Clrn1-202ENSMUST00000055636 Mtco1P00397 514 aa7.56□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms