RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Ppfia4B8QI36 1187 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Ttc17E9PVB5 1198 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 TnfP06804 235 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 H2afzP0C0S6 128 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gjc1P28229 396 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Dpep1P31428 410 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gnl1P36916 607 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 H2afvQ3THW5 128 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Ppp1r12cQ3UMT1 782 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Serpina3bQ8BYY9 420 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gtpbp10Q8K013 366 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 PpanQ91YU8 470 aaKnown RBP24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Luc7lQ9CYI4 371 aaKnown RBP24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Rnf225Q9D7D1 332 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Tlr6Q9EPW9 795 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Doc2gQ9ESN1 387 aa24.33■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Casp14O89094 257 aa24.32■■□□□ 1.48
Upf3a-201ENSMUST00000043767 FpgsP48760 587 aa24.32■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Rnf19aP50636 840 aa24.32■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Rad54lP70270 747 aa24.32■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Phactr1Q2M3X8 580 aa24.32■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Q6PD19 689 aa24.32■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Olfr30Q8VGD8 315 aa24.32■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Extl1Q9JKV7 669 aa24.32■■□□□ 1.48
Upf3a-201ENSMUST00000043767 ZxdbA2CE44 873 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Itgb3O54890 787 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Xrcc5P27641 732 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Aldh2P47738 519 aaKnown RBP24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Usp10P52479 792 aaKnown RBP24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 LipeP54310 759 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Ttc39dQ0VF76 604 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Nhej1Q3KNJ2 295 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Tax1bp1Q3UKC1 814 aaKnown RBP24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 SpdyaQ5IBH7 310 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Mysm1Q69Z66 819 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gpr156Q6PCP7 798 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 BbxQ8VBW5 907 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 DarsQ922B2 501 aaKnown RBP24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Trp53inp1Q9QXE4 239 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Galk1Q9R0N0 392 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Slc26a3Q9WVC8 757 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Trim30bE9PVL6 203 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gm3127E9Q9P5 263 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gm3453K7N724 263 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Rrm1P07742 792 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Cd163Q2VLH6 1121 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Ugt1a9Q62452 528 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Arl5cQ6P068 179 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Syt15Q8C6N3 418 aa24.31■■□□□ 1.48
Upf3a-201ENSMUST00000043767 4933406M09RikG3XA12 479 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gm42641I6L9G2 585 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gm3739L7N296 216 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Cpsf2O35218 782 aaKnown RBP24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 ZfxP17012 799 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 P3h1Q3V1T4 739 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Fam92bQ3V2J0 292 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gm5935Q497S0 212 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Sin3bQ62141 1098 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Ints2Q80UK8 1198 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 SowahaQ8BLS7 548 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 AtripQ8BMG1 785 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Golph3Q9CRA5 298 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Stk4Q9JI11 487 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gadd45gQ9Z111 159 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Casp8ap2Q9WUF3 1962 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Ttc3O88196 1979 aaKnown RBP24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Btbd18A0A0A6YY25 723 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Tcp1P11983 556 aaKnown RBP24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Pcsk1P63239 753 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Znf367Q0VDT2 340 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Llgl1Q80Y17 1036 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Prr11Q8BHE0 368 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Snip1Q8BIZ6 383 aaKnown RBP24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 IntS13Q8QZV7 732 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Pcdhgb4Q91XX6 912 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 MlklQ9D2Y4 472 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 IscuQ9D7P6 168 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Peg12Q9WVA7 283 aa24.3■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Supt3B0QZW4 406 aa24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Hspa8P63017 646 aaKnown RBP24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Sox8Q04886 464 aa24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 MlxipQ2VPU4 917 aa24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Cyfip2Q5SQX6 1253 aa24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Zrsr2Q62377 462 aaKnown RBP24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 ChpfQ6IQX7 774 aa24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Kiaa1328Q6NZK5 612 aa24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Daam2Q80U19 1115 aa24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 MogsQ80UM7 834 aaKnown RBP24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Ttc16Q8C1F5 767 aa24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Wdr11Q8K1X1 1223 aa24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gstt4Q9D4P7 240 aa24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Myo16Q5DU14 1919 aa24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Lama3Q61789 3330 aa24.29■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gm45861A0A1B0GRY3 1923 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Cntnap5aQ0V8T9 1304 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Olfr391-psA0A0U1RNJ4 312 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gm45713A0A1B0GS68 446 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gm27029A2A4P4 543 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Abcb5B5X0E4 1255 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Cd44P15379 778 aa24.28■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms