RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Fbln2P37889 1221 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 PkmP52480 531 aaKnown RBP13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cops2P61202 443 aaKnown RBP13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 4930502E18RikQ14BQ3 236 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gm1587Q3UT80 123 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Qsox1Q8BND5 748 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Iffo1Q8BXL9 562 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Slc7a14Q8BXR1 771 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Trmt13Q8BYH3 481 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Zfp120Q8BZW4 436 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Usp20Q8C6M1 916 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ugt3a2Q8JZZ0 523 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Plcb4Q91UZ1 1175 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Pcdha3Q91Y16 942 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Pde2aQ922S4 916 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Foxp3Q99JB6 429 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Zfp715G3X9T1 886 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Hnrnph1O35737 449 aaKnown RBP13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Uchl4P58321 233 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Abi2P62484 446 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 HarsQ61035 509 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Znf12Q7TSI0 686 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 RimklbQ80WS1 387 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ints6lQ8BND4 861 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Adgra1Q8C4G9 578 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Adgrg2Q8CJ12 1009 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ube2q2Q8K2Z8 378 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Uroc1Q8VC12 676 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Upb1Q8VC97 393 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Dnajc28Q8VCE1 385 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 CactinQ9CS00 772 aaKnown RBP13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cul2Q9D4H8 745 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gpatch1Q9DBM1 930 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Orc3Q9JK30 715 aaKnown RBP13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Entpd5Q9WUZ9 427 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Nfs1Q9Z1J3 459 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Rabgap1A2AWA9 1064 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Lipo2D3YY49 398 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Tmem120bQ3TA38 339 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gm13103Q4VAD2 491 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 LbpQ61805 481 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mov10l1Q99MV5 1187 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Atp6v1e2Q9D593 226 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ggps1Q9WTN0 300 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mpp2Q9WV34 552 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Nup210lQ9D2F7 1881 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Disp2Q8CIP5 1345 aa13.43□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Svs3aF2Z472 265 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Prom1O54990 867 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Krt8P11679 490 aaKnown RBP13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Drg1P32233 367 aaKnown RBP13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Hsd17b2P51658 381 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 DmpkP54265 631 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cyp2j11Q3UNV2 504 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Krt12Q64291 487 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Nlrp14Q6B966 993 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Vat1lQ80TB8 417 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Fbxo44Q8BK26 255 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Dnali1Q8BVN8 258 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Svs3bQ8BZH8 265 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ccdc65Q8VHI7 493 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Q9CQC3 228 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Apba1B2RUJ5 842 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cyp2c69E9PXC3 491 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gm5795E9PZN8 263 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cyp2b9P12790 491 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cyp2c40P56657 491 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Lhx5P61375 402 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Pi4k2aQ2TBE6 479 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Abhd15Q5F2F2 459 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cd180Q62192 661 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Myo6Q64331 1265 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Tmc8Q7TN58 722 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Fam185aQ7TPD2 378 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Zswim5Q80TC6 1188 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cep104Q80V31 926 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Nlrp4aQ8BU40 982 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Q8BZE1 841 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Tmem132cQ8CEF9 1099 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Lamtor4Q8CF66 99 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ints9Q8K114 658 aaKnown RBP13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mfsd5Q921Y4 450 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Thap12Q9CUX1 758 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 B4galt5Q9JMK0 388 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Dicer1Q8R418 1916 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Tldc2A2ACG1 198 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Trim55G3X8Y1 545 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Lamp1P11438 406 aaKnown RBP13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Art2aP17981 287 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ptk2P34152 1090 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 St3gal1P54751 337 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Smyd1P97443 490 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Q3UE31 404 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Elf3Q3UPW2 391 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Nlrp4eQ66X19 978 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mbtd1Q6P5G3 631 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Atl2Q6PA06 583 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Entpd3Q8BFW6 529 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cog3Q8CI04 820 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Slf1Q8R3P9 1054 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 178.9 ms