RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Lrif1Q8CDD9 755 aa12.13□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Chn1Q91V57 459 aa12.13□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Ndfip2Q91ZP6 311 aa12.13□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Dnajc19Q9CQV7 116 aa12.13□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Ccdc88cQ6VGS5 2009 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Rnf19bA2A7Q9 732 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 NuggcD3YWJ0 796 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Olfr247E9PVJ7 320 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Olfr819K7N727 320 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Vmn2r71L7N2D8 855 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 FxnO35943 207 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 HdcP23738 662 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Fdft1P53798 416 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Fam172aQ3TNH5 417 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Oca2Q62052 833 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Atp2a3Q64518 1038 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Ano5Q75UR0 904 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 PicalmQ7M6Y3 660 aaKnown RBP12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Ddx19bQ8BZY3 494 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Dennd2aQ8C4S8 1000 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Oxnad1Q8VE38 311 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Sec14l2Q99J08 403 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Hsf2bpQ9D4G2 338 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Gm21897J3KMP5 500 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Gm21750L7N228 499 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Serpinb9eO08806 377 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 AoahO35298 574 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 CraddO88843 199 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Gria2P23819 883 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Pex2P55098 305 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Hspa8P63017 646 aaKnown RBP12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 StimateQ3UF25 288 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Nutm2Q3V0C3 733 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Akap14Q3V0I7 536 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Ndufaf2Q59J78 168 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Dph1Q5NCQ5 438 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Snx19Q6P4T1 997 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Ubxn7Q6P5G6 467 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Catsper3Q80W99 395 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 StgQ8BM15 349 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Armc6Q8BNU0 468 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 SowahcQ8C0J6 512 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Pex5lQ8C437 567 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 C130026I21RikQ8C898 291 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Stoml1Q8CI66 399 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Ciapin1Q8WTY4 309 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Grhl1Q921D9 618 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Smtnl1Q99LM3 459 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Tmem81Q9D5K1 259 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Q9D5Q8 446 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Clic3Q9D7P7 237 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 EmcnQ9R0H2 261 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Chek2Q9Z265 546 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Scn9aQ62205 1984 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Zfp612A0A1D5RMC2 672 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Acnat1A2AKK5 416 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Sult2a6B2RVI8 285 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Gm10639E9Q6L7 222 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Zfp788E9Q980 884 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 UncxO08934 530 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Gsta2P10648 222 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 InaP46660 501 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Setd4P58467 439 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 GapdhsQ64467 440 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 TbcdQ8BYA0 1196 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Prpf31Q8CCF0 499 aaKnown RBP12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Mboat7Q8CHK3 473 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Pdk3Q922H2 415 aaKnown RBP12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Prl7c1Q9CRB5 251 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Tdrd12Q9CWU0 1215 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Tacc2Q9JJG0 1149 aa12.12□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Akap17bA2A3V1 959 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Rabgap1lA6H6A9 815 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Lonrf2B2RT44 518 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Lonrf1D3YY23 762 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Ckmt1P30275 418 aaKnown RBP12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Akr1b1P45376 316 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Faf1P54731 649 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Cdh5P55284 784 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Hps5P59438 1126 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Acot10Q32MW3 439 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Tmem184cQ3TPR7 525 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Trpc1Q61056 793 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Hesx1Q61658 185 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Scube1Q6NZL8 1018 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Clec7aQ6QLQ4 244 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Zfp120Q8BZW4 436 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Ccdc17Q8CE13 565 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Gramd1aQ8VEF1 722 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Tceal1Q921P9 165 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Tom1l1Q923U0 474 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Slc5a5Q99PN0 618 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Lrrc18Q9CQ07 262 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Efhd1Q9D4J1 240 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 4921524L21RikQ9D5T2 438 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Cmtm5Q9D6G9 156 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Tjap1Q9DCD5 539 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Yipf5Q9EQQ2 257 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Ccdc22Q9JIG7 627 aa12.11□□□□□ -0.47
Sdc1-201ENSMUST00000020911 Gpc6Q9R087 555 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms