RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B YMR141CP40211 102 aa-0.97□□□□□ -2.56
snR39BsnR39B YMR144WP40214 342 aaKnown RBP-0.97□□□□□ -2.56
snR39BsnR39B ALB1P47019 175 aaPredicted RBP-0.97□□□□□ -2.56
snR39BsnR39B PET191Q02772 108 aa-0.97□□□□□ -2.56
snR39BsnR39B YDC1Q02896 317 aa-0.97□□□□□ -2.56
snR39BsnR39B KEI1Q06346 221 aa-0.97□□□□□ -2.56
snR39BsnR39B PST2Q12335 198 aaKnown RBP-0.97□□□□□ -2.56
snR39BsnR39B ATP15P21306 62 aa-0.98□□□□□ -2.57
snR39BsnR39B MOB1P40484 314 aa-0.98□□□□□ -2.57
snR39BsnR39B YAR1P46683 200 aa-0.98□□□□□ -2.57
snR39BsnR39B SEN15Q04675 128 aa-0.98□□□□□ -2.57
snR39BsnR39B DGA1Q08650 418 aa-0.98□□□□□ -2.57
snR39BsnR39B BTS1Q12051 335 aa-0.98□□□□□ -2.57
snR39BsnR39B YLR126CQ12288 251 aa-0.98□□□□□ -2.57
snR39BsnR39B TDA8Q6B2U8 126 aa-0.98□□□□□ -2.57
snR39BsnR39B SSK22P25390 1331 aaPredicted RBP-0.98□□□□□ -2.57
snR39BsnR39B DUR1,2P32528 1835 aaKnown RBP-0.99□□□□□ -2.57
snR39BsnR39B YKR070WP36151 352 aaKnown RBP-0.99□□□□□ -2.57
snR39BsnR39B ETR1P38071 380 aa-0.99□□□□□ -2.57
snR39BsnR39B TVP23P38962 199 aa-0.99□□□□□ -2.57
snR39BsnR39B YDR286CQ05530 114 aa-0.99□□□□□ -2.57
snR39BsnR39B PGC1Q08959 321 aa-0.99□□□□□ -2.57
snR39BsnR39B LSO2Q3E772 92 aaKnown RBP-0.99□□□□□ -2.57
snR39BsnR39B TOR1P35169 2470 aa-0.99□□□□□ -2.57
snR39BsnR39B BLM10P43583 2143 aa-1□□□□□ -2.57
snR39BsnR39B TCA17P32613 152 aa-1□□□□□ -2.57
snR39BsnR39B AST2P39945 430 aaKnown RBP-1□□□□□ -2.57
snR39BsnR39B YDR249CQ03787 373 aa-1□□□□□ -2.57
snR39BsnR39B YLR173WQ06247 608 aa-1□□□□□ -2.57
snR39BsnR39B CSM4Q08955 156 aa-1□□□□□ -2.57
snR39BsnR39B SNU23Q12368 194 aaPredicted RBP-1□□□□□ -2.57
snR39BsnR39B DRS2P39524 1355 aa-1□□□□□ -2.57
snR39BsnR39B ROM2P51862 1356 aaKnown RBP-1□□□□□ -2.57
snR39BsnR39B POR1P04840 283 aaKnown RBP-1.01□□□□□ -2.57
snR39BsnR39B POL30P15873 258 aaKnown RBP-1.01□□□□□ -2.57
snR39BsnR39B IDH1P28834 360 aaKnown RBP RIP-Chip data-1.01□□□□□ -2.57not detected
snR39BsnR39B ARO7P32178 256 aa-1.01□□□□□ -2.57
snR39BsnR39B AIM25P47140 327 aa-1.01□□□□□ -2.57
snR39BsnR39B MCM22P47167 239 aa-1.01□□□□□ -2.57
snR39BsnR39B YDR209CQ03480 137 aa-1.01□□□□□ -2.57
snR39BsnR39B COX20Q04935 205 aa-1.01□□□□□ -2.57
snR39BsnR39B IRC23Q08416 157 aa-1.01□□□□□ -2.57
snR39BsnR39B UBC6P33296 250 aaPredicted RBP-1.02□□□□□ -2.57
snR39BsnR39B MRP1P10662 321 aaKnown RBP-1.03□□□□□ -2.57
snR39BsnR39B TCP1P12612 559 aaKnown RBP-1.03□□□□□ -2.57
snR39BsnR39B URA5P13298 226 aaKnown RBP-1.03□□□□□ -2.57
snR39BsnR39B RPB3P16370 318 aaKnown RBP-1.03□□□□□ -2.57
snR39BsnR39B SHB17P36136 271 aaKnown RBP-1.03□□□□□ -2.57
snR39BsnR39B MPM1P40364 252 aa-1.03□□□□□ -2.57
snR39BsnR39B REX3Q12090 404 aa-1.03□□□□□ -2.57
snR39BsnR39B GET4Q12125 312 aa-1.03□□□□□ -2.57
snR39BsnR39B MDN1Q12019 4910 aaKnown RBP-1.04□□□□□ -2.58
snR39BsnR39B TPM1P17536 199 aaKnown RBP-1.04□□□□□ -2.58
snR39BsnR39B BET1P22804 142 aa-1.04□□□□□ -2.58
snR39BsnR39B SFK1P35735 353 aa-1.04□□□□□ -2.58
snR39BsnR39B SBH2P52871 88 aa-1.04□□□□□ -2.58
snR39BsnR39B YGL235WP53071 178 aa-1.04□□□□□ -2.58
snR39BsnR39B PRM8P53174 237 aa-1.04□□□□□ -2.58
snR39BsnR39B RNH1Q04740 348 aa-1.04□□□□□ -2.58
snR39BsnR39B SDO1Q07953 250 aaKnown RBP-1.04□□□□□ -2.58
snR39BsnR39B MDY2Q12285 212 aa-1.04□□□□□ -2.58
snR39BsnR39B YIL177CP40434 1758 aa-1.04□□□□□ -2.58
snR39BsnR39B YJL225CP40889 1758 aa-1.04□□□□□ -2.58
snR39BsnR39B UTP20P35194 2493 aaKnown RBP-1.05□□□□□ -2.58
snR39BsnR39B GSC2P40989 1895 aa-1.05□□□□□ -2.58
snR39BsnR39B YAR023CD6VPM8 179 aa-1.05□□□□□ -2.58
snR39BsnR39B TRX1P22217 103 aaKnown RBP-1.05□□□□□ -2.58
snR39BsnR39B MSN4P33749 630 aa-1.05□□□□□ -2.58
snR39BsnR39B HOC1P47124 396 aa-1.05□□□□□ -2.58
snR39BsnR39B TRM9P49957 279 aa-1.05□□□□□ -2.58
snR39BsnR39B YGR050CP53231 118 aa-1.05□□□□□ -2.58
snR39BsnR39B NOP19P53317 196 aaPredicted RBP-1.05□□□□□ -2.58
snR39BsnR39B RRN5Q02983 363 aa-1.05□□□□□ -2.58
snR39BsnR39B YOR072WQ08486 104 aa-1.05□□□□□ -2.58
snR39BsnR39B YOR342CQ12182 319 aa-1.05□□□□□ -2.58
snR39BsnR39B RRP36Q12481 300 aaPredicted RBP-1.05□□□□□ -2.58
snR39BsnR39B KSS1P14681 368 aa-1.06□□□□□ -2.58
snR39BsnR39B DBP3P20447 523 aaKnown RBP-1.06□□□□□ -2.58
snR39BsnR39B OPI1P21957 404 aa-1.06□□□□□ -2.58
snR39BsnR39B ASF2P32448 525 aaPredicted RBP-1.06□□□□□ -2.58
snR39BsnR39B YBL010CP32788 280 aa-1.06□□□□□ -2.58
snR39BsnR39B NTF2P33331 125 aaKnown RBP-1.06□□□□□ -2.58
snR39BsnR39B HTD2P38790 280 aaKnown RBP-1.06□□□□□ -2.58
snR39BsnR39B YGL230CP53074 147 aa-1.06□□□□□ -2.58
snR39BsnR39B GET1P53192 235 aa-1.06□□□□□ -2.58
snR39BsnR39B MGR2Q02889 113 aa-1.06□□□□□ -2.58
snR39BsnR39B RRP17Q04031 235 aaPredicted RBP-1.06□□□□□ -2.58
snR39BsnR39B CDC123Q05791 360 aa-1.06□□□□□ -2.58
snR39BsnR39B YOR034C-AQ3E735 80 aa-1.06□□□□□ -2.58
snR39BsnR39B BCY1P07278 416 aaKnown RBP-1.07□□□□□ -2.58
snR39BsnR39B STF2P16965 84 aa-1.07□□□□□ -2.58
snR39BsnR39B PPA2P28239 310 aa-1.07□□□□□ -2.58
snR39BsnR39B GSP2P32836 220 aaKnown RBP-1.07□□□□□ -2.58
snR39BsnR39B RIB7P33312 244 aa-1.07□□□□□ -2.58
snR39BsnR39B YNL033WP53964 284 aa-1.07□□□□□ -2.58
snR39BsnR39B YMR295CQ03559 197 aa-1.07□□□□□ -2.58
snR39BsnR39B YNG1Q08465 219 aa-1.07□□□□□ -2.58
snR39BsnR39B MED4Q12343 284 aa-1.07□□□□□ -2.58
snR39BsnR39B SEY1Q99287 776 aa-1.07□□□□□ -2.58
snR39BsnR39B IKI3Q06706 1349 aaKnown RBP-1.08□□□□□ -2.58
Retrieved 100 of 5,963 RNA–protein pairs in 131.7 ms